Gene Information

Name : A464_2899 (A464_2899)
Accession : YP_008323494.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Type III secretion transcriptional regulator HilD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2884815 - 2885744 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAATGTAACCTTTGTAAGTAATAGTCATCTGCGTCCTGCCGCGGATAACTTACAGAAATTAAAATCACTTTTGAC
GAACACCCAGCAGCAAATTAAAAGTCAGACTCAGCAGCTCACCATAAAAAATCTTTATGTAAGCAGTTTCACTTTAGTTT
GCTTCCGTAGCGGTAAACTGACGATTAGCAACAATCACGATACCATTTACTGTGAAGAGCCTGGGATGTTGGTACTCAAA
AAGGAGCAAGTTGTTAGCGTAACGCTTGAAGAAGTCAATGGTCATATGGATTTCGATGTCCTTGAGATACCCACACAACG
CCTTGGCGATCTCTATTCACTCATCCCAAATGACCAGCAAACTAAAATGACAATACCCACAGAGAAAGCGCAGACGATTT
TCTATACGCCTGACTTTCCTGCCAGAAAGGAGGTGTTTGAACATCTGAAAACGGCGTTTTCCTGTACAAAGGATACCAGC
AAAGGTTGCAGTAACTGTAACAACCAAAGTTGTATTGAAAATGAAGAATTAATTCCTTATTTTCTACTGTTCCTGCTTAC
CGCTTTCCTCCGCCTTCCGGAGAGTTATGAGATCATCCTTAGCTCAGCGCAGATAACGTTAAAGGAGCGCGTCTACAACA
TTATTTCTTCCTCCCCGGGCAGGCAGTGGAAGCTTACAGATGTCGCTGCACATATATTTATGAGCACATCAACGCTTAAA
CGTAAACTGGCAGAAGAAGGCACCAGCTTTAGTGACATCTATTTGTCCGCCAGGATGAATCAGGCAGCAAAACTTTTGCG
CATAGGTAATCATAATGTCAATGCGGTAGCATTAAAATGCGGTTATGACAGTACGTCCTACTTCATTCAGTGTTTTAAGA
AATACTTTAAAACTACGCCATCGACATTCATTAAAATGGCAAATCACTAA

Protein sequence : 
MENVTFVSNSHLRPAADNLQKLKSLLTNTQQQIKSQTQQLTIKNLYVSSFTLVCFRSGKLTISNNHDTIYCEEPGMLVLK
KEQVVSVTLEEVNGHMDFDVLEIPTQRLGDLYSLIPNDQQTKMTIPTEKAQTIFYTPDFPARKEVFEHLKTAFSCTKDTS
KGCSNCNNQSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKERVYNIISSSPGRQWKLTDVAAHIFMSTSTLK
RKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilD YP_217794.1 regulatory protein Virulence SPI-1 Protein 2e-124 96
hilD NP_461796.1 invasion protein regulatory protein Virulence SPI-1 Protein 2e-125 95
STY2996 NP_457269.1 AraC-family transcriptional regulator Not tested SPI-1 Protein 5e-124 95
t2777 NP_806478.1 AraC family transcriptional regulator Not tested SPI-1 Protein 5e-124 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2899 YP_008323494.1 Type III secretion transcriptional regulator HilD VFG0537 Protein 1e-125 95