Gene Information

Name : A464_2895 (A464_2895)
Accession : YP_008323490.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Type III secretion bridge between inner and outer membrane lipoprotein (YscJHrcJEscJ PscJ)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2881965 - 2882723 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence :
ATGATTCGTCGATATCTATATACCTTTCTGCTGGTAATGACCCTTGCCGGCTGTAAGGATAAGGATTTATTAAAAGGACT
GGACCAGGAACAGGCTAATGAGGTCATTGCCGTTCTGCAAATGCATAATATAGAGGCGAATAAAATTGATAGCGGAAAAT
TGGGCTATAGCATTACCGTTGCTGAGCCCGATTTTACCGCCGCGGTGTACTGGATTAAAACTTATCAGCTGCCTCCCCGG
CCACGGGTAGAAATAGCGCAGATGTTCCCGGCGGATTCGCTGGTCTCATCTCCGCGAGCTGAAAAGGCCCGGTTATATTC
GGCTATTGAGCAGCGACTGGAACAGTCATTACAGACGATGGAGGGCGTGCTCTCCGCCAGGGTCCATATTAGTTATGATA
TTGATGCTGGTGAAAATGGACGTCCGTCAAAACCGGTTCATTTATCGGCATTAGCGGTATATGAACGAGGTTCGCCGCTG
GCGCATCAGATCAGCGATATCAAGCGGTTTTTAAAGAATAGTTTTGCCGATGTGGATTATGACAACATTTCTGTGGTGTT
GTCAGAACGTACGGACGCCCAGTTGCAGGCTCCCGGTACGCCAGTAAAACGTAATTCTTTTGAAACCAGCTGGATTGTAC
TGATTATCTTGTTATCCGTGATGTCGGCAGGATTGGGCGTCTGGTATTACAAAAATCATTATGCCGCCAATAAGAAAGGC
ATAACGACTGATGAGAAGGCGAAATCGTCGAATGAATAG

Protein sequence :
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR
PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPSKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERTDAQLQAPGTPVKRNSFETSWIVLIILLSVMSAGLGVWYYKNHYAANKKG
ITTDEKAKSSNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 1e-113 98
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-113 98
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 7e-114 98
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 7e-114 98
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 1e-56 55
ECs3716 NP_311743.1 EprK Not tested LIM Protein 3e-54 55
eprK AAZ31284.1 EprK Virulence ETT2 Protein 4e-53 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2895 YP_008323490.1 Type III secretion bridge between inner and outer membrane lipoprotein (YscJHrcJEscJ PscJ) VFG0533 Protein 3e-114 98
A464_2895 YP_008323490.1 Type III secretion bridge between inner and outer membrane lipoprotein (YscJHrcJEscJ PscJ) VFG0998 Protein 3e-45 48
A464_2895 YP_008323490.1 Type III secretion bridge between inner and outer membrane lipoprotein (YscJHrcJEscJ PscJ) VFG1787 Protein 3e-37 47