Gene Information

Name : A464_2885 (A464_2885)
Accession : YP_008323480.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter inner membranepermease protein SitC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2875074 - 2875934 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
ATGAACTGGCTTGTCGAGCCGTTTGGCTATCAGTATATGCTCAACGCGATGTGGGTCTCCGCGATGGTGGGGGGACTGTG
CGCCTTTCTCTCCTGCTATTTAATGCTCAAAGGCTGGTCACTGATTGGCGATGCGTTATCCCACTCTATTGTGCCAGGGG
TTGCGGGTGCCTGGATGTTAGGGCTGCCTTTCTCACTCGGGGCGTTTCTTTCCGGCGGTCTGGCGGCAGGCAGTATGCTT
TTTCTTAACCAACGCTCGCGCCTGAAAGAAGACGCCATTATTGGGCTTATCTTCTCCTCTTTTTTTGGCGTCGGTCTTTT
TATGGTTTCGCTCAATCCGATGTCGGTGAATATCCAGACCATTATTCTCGGCAACGTACTGGCGATCGCGCCAGCGGACA
TTTTGCAACTGGCGATTATCGGCGTAGTCTCGCTGACGATTCTGCTATTCAAGTGGAAAGATCTGATGGTCGTCTTTTTC
GACGAAACCCATGCACGGTCCATCGGCCTTCATCCGGGCCGCCTGAAGCTATTGTTTTTTACCCTCTTGTCTGTCTCCAC
CGTGGCAGCCCTGCAAACCGTCGGGGCATTTCTGGTGATCTGTCTCGTCGTCACGCCGGGCGCAACGGCTTGGTTATTAA
CCGACCGCTTCCCACGCCTGCTTGCTATTGCCTTCGCCATTGGCAGCCTGACCAGTTTTTTAGGCGCCTGGCTTAGTTAC
TGGCTGGATGGTGCCACTGGTGGGATTATCGTCGTCATGCAAACGTTGCTGTTTCTCACGGCCTTTATTTTTGCCCCAAA
ACAGGGTTTGTTAGCCAACCGCCGGCGCGCCCGCCTGCATAAGGAGGCGTCATGTTCTTAA

Protein sequence : 
MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGVGLFMVSLNPMSVNIQTIILGNVLAIAPADILQLAIIGVVSLTILLFKWKDLMVVFF
DETHARSIGLHPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAFAIGSLTSFLGAWLSY
WLDGATGGIIVVMQTLLFLTAFIFAPKQGLLANRRRARLHKEASCS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-110 96
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-110 96
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-110 96
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-110 96
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-110 96

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2885 YP_008323480.1 Manganese ABC transporter inner membranepermease protein SitC BAC0351 Protein 2e-110 96
A464_2885 YP_008323480.1 Manganese ABC transporter inner membranepermease protein SitC BAC0441 Protein 2e-74 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2885 YP_008323480.1 Manganese ABC transporter inner membranepermease protein SitC VFG0527 Protein 2e-110 96