Gene Information

Name : A464_2884 (A464_2884)
Accession : YP_008323479.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2874256 - 2875077 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAATCTGCGATTACCGTTGATCAAGTCACGGTGACGTATCGCAACGGTCATACCGCCCTGCGGGATGCCACTTT
TCAGGTGCCAGGAGGTTCAATCGCCGCACTGGTTGGCGTAAACGGTTCCGGTAAGTCTACGTTATTTAAAGCATTAATGG
GTTTTGTGCATCTTGCCCGGGGGGATATTACTATCCTGCAACAGCCGGTCAACAAGGCGCTGAAAAAAAACCTCATTGCT
TATGTTCCACAATCGGAAGAGGTGGACTGGTCATTTCCGGTGCTGGTAGAAGATGTGGTGATGATGGGGCGCTATGGCCA
TATGGGCTGGCTGCGCCGTCCCACAGCACATGATCACGCCTGTGTTGACGCCGCGCTGGCGCGGGTGGATATGCAGGAAT
ATCGCCACCGGCAGATTGGCGAATTATCCGGCGGGCAGAAAAAACGTGTCTTTCTCGCCAGGGCTATCGCTCAGGATGGG
CAAGTTATTCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCCCGAATCATTGATCTGCTGCGGGAACT
GCGAAATGAGGGCCGCACCATGCTGGTATCAACACATAATCTCGGTTCCGTCACCGAGTTTTGCGACTATACGGTCATGA
TTAAAGGAACCGTACTGGCCAGCGGTCCTACGGAAACCACTTTTACCGCCGCGAATCTGGAACTGGCGTTTAGCGGTGTC
CTACGTCATATCGCGCTAAGCGGCAGCGAAGAGCATATTATCACCGATGACGAACGCCCCTTTATTTCCCGGCGCGTGGC
CAGCGGAGGAAAATCGTCATGA

Protein sequence :
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLARGDITILQQPVNKALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRNEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLELAFSGV
LRHIALSGSEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-127 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-127 99
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-126 99
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-126 99
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-126 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2884 YP_008323479.1 Manganese ABC transporter ATP-binding protein SitB BAC0350 Protein 2e-126 99
A464_2884 YP_008323479.1 Manganese ABC transporter ATP-binding protein SitB BAC0440 Protein 8e-81 63
A464_2884 YP_008323479.1 Manganese ABC transporter ATP-binding protein SitB BAC0400 Protein 7e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2884 YP_008323479.1 Manganese ABC transporter ATP-binding protein SitB VFG0526 Protein 1e-126 99