Gene Information

Name : A464_2883 (A464_2883)
Accession : YP_008323478.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter periplasmic-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2873342 - 2874259 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence : 
ATGACGAATCTGCGCCGTCTGAAAACGCTTCTGATTGCCGGTACTGTAGCGATACTTGCGCTATCGCCGGCCTATGCAAA
AGAGAAATTTAAAGTGATCACCACGTTCACTGTTATCGCCGACATGGCGAAAAACGTGGCGGGCGACGCAGCGGACGTCA
GCTCGATTACCAAGCCCGGCGCTGAAATCCATGAGTATCAGCCAACCCCTGGCGATATTAAACGGGCACAGGGAGCACAA
CTTATTCTTGCAAACGGTCTGAACCTGGAGCGGTGGTTCGCCCGCTTTTATCAGCATCTTTCCGGCGTACCGGAAGTGGT
CGTCTCTACTGGTGTTAAACCGATGGGGATTACCGAAGGTCCTTATAACGGTAAGCCGAACCCACATGCCTGGATGTCGG
CTGAAAATGCGCTGATTTATGTCGATAACATTCGCGACGCACTGGTGAAGTACGATCCGGATAATGCGGCAACCTATAAG
CAAAACGCTGAACATTATAAAGCGCAAATTCGCCAGATGGCCGATCCATTGCGCGCTGAACTGGAAAAAATCCCTGCCGA
TCAGCGCTGGCTGGTCACCAGCGAAGGCGCTTTCTCGTATCTGGCGCGCGATAACGATATGAAAGAACTCTATCTGTGGC
CGATTAACGCCGATCAGCAAGGTACGCCGAAACAAGTGCGTAAAGTGATCGATACCATTAAAAAGCACCATATCCCCGCC
ATCTTTAGCGAGAGTACGGTTTCCGATAAACCTGCCCGTCAGGTCGCGCGTGAATCCGGTGCGCATTATGGCGGTGTGCT
GTATGTCGATTCGCTGAGCGCCGCCGATGGCCCGGTGCCGACCTATCTGGATCTGCTCCGTGTCACTACTGAAACTATCG
TCAATGGCATCAACGACGGTCTGAGGAGTCAACAATGA

Protein sequence : 
MTNLRRLKTLLIAGTVAILALSPAYAKEKFKVITTFTVIADMAKNVAGDAADVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLERWFARFYQHLSGVPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAATYK
QNAEHYKAQIRQMADPLRAELEKIPADQRWLVTSEGAFSYLARDNDMKELYLWPINADQQGTPKQVRKVIDTIKKHHIPA
IFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVNGINDGLRSQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-139 98
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-139 98
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-139 98
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-139 98
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-139 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2883 YP_008323478.1 Manganese ABC transporter periplasmic-binding protein SitA BAC0349 Protein 1e-139 98
A464_2883 YP_008323478.1 Manganese ABC transporter periplasmic-binding protein SitA BAC0439 Protein 5e-90 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2883 YP_008323478.1 Manganese ABC transporter periplasmic-binding protein SitA VFG0525 Protein 1e-139 98