Gene Information

Name : A464_2522 (A464_2522)
Accession : YP_008323117.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Type III secretion transcriptional regulator HilD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2505129 - 2506040 bp
Length : 912 bp
Strand : -
Note : -

DNA sequence :
ATGAGAAGCATTATTAATAACACGAAGTGTGCAGGCGTGGTAAATTGTAAACAAAAAAATATTAATAGTGTCCTTCTGTG
TCAGTCAGATACCGGGGTTTCACTTAATCATATCTATGTTACTAACACTACACTTATCAAATTAAGTGCAGGATCATTGA
ATATTACTTCCAGTTGGAATGAGGTGCTGAATTGCTCCGGAGAATGTCTTATTCTTATCGAGAAAAATCAAACCTTAAGT
ATAAGTTGCAGTGAGATTGATAACCATCTGGATTTTAAGGTAATTGATATTCCATATAACCTAATGAGTAAAATGTACTC
ATTGTTTCTTTCTGAGAGTAAACCGGGAACTATGTTAAATATGAAAAAAGACATTAGTTCCCGTATGCTTTCGTCACCAC
TAAGCCCGGGAATGAATGAAGCCTTTGACAATGTGTTTGACTGTCTTCGAAAAGTAGAGCGCAGTGAATGTGGAGATTGT
ACTAGCTGTCATTCAGAATCCGAAGGCTCTCCGCTGGATTTCACGCTAATGTTCCTGCTTTCTGCTTTTACTACTCATGA
AGATGGTATTGGTATACTGTCCCGAACGTTAAAATCAAGTTTAAGGGAGAAAACATTTAACATCATTAACAGCGACCCCT
CCAGACACTGGAATCTTGATGATGTTGCGATGAACCTGTACATGAGTCGCTCTACGCTCAAGCGTAAGCTCGCTGCAGAG
GGAACATCATTTAGTGAAATCTATCTTAATGCCAGGATGCACAGGGCTGCAAGATTATTGCGTACAGGAGACCATAATAT
TAACCAGGTTGCCGTGATGTGCGGGTACAATCGCCCCTCTTTTTTTATCACCACATTCAGAAAATATTTTCAGATGACTC
CATATACATTTATGAAACTGACTAATCACTGA

Protein sequence :
MRSIINNTKCAGVVNCKQKNINSVLLCQSDTGVSLNHIYVTNTTLIKLSAGSLNITSSWNEVLNCSGECLILIEKNQTLS
ISCSEIDNHLDFKVIDIPYNLMSKMYSLFLSESKPGTMLNMKKDISSRMLSSPLSPGMNEAFDNVFDCLRKVERSECGDC
TSCHSESEGSPLDFTLMFLLSAFTTHEDGIGILSRTLKSSLREKTFNIINSDPSRHWNLDDVAMNLYMSRSTLKRKLAAE
GTSFSEIYLNARMHRAARLLRTGDHNINQVAVMCGYNRPSFFITTFRKYFQMTPYTFMKLTNH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sprA NP_457261.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 8e-51 42
sprA NP_806470.1 AraC family transcriptional regulator Virulence SPI-1 Protein 8e-51 42
hilC YP_217786.1 AraC family transcriptional regulator Not tested SPI-1 Protein 3e-51 42
hilC NP_461788.1 invasion regulatory protein Virulence SPI-1 Protein 2e-51 42
sprA AAD37784.1 transcriptional regulator SprA Virulence SPI-1 Protein 2e-51 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_2522 YP_008323117.1 Type III secretion transcriptional regulator HilD VFG0531 Protein 9e-52 42