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Name : A464_25 (A464_25) Accession : YP_008320621.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : Outer membrane usher protein SfmD Function : - COG functional category : - COG ID : - EC number : - Position : 26354 - 28924 bp Length : 2571 bp Strand : + Note : - DNA sequence : GTGCTGACCGGGCTGGCGCTGGCTATGGCATGGGGGCCTGTGTCTGGTCGGGCGGAAAACTATTTTAACCCGGCATTTTT GTCTGACGACCCGTCGGCAGTGGCCGACTTATCGACTTTTTCCCGTAATGCCCAGGCGGCGGGAACGTATCGTGTCGACG TTTATCTGAATAATACGTTTCTCGCTGCCAAAGATATTGCTTTCCTGGCGGTGAAAACGTCAGGAAAAGGCGCAAAATCC GATGATAGCGGCTTGCGCGCCTGTCTGACGCCTGAAATGCTAAAAAGTATGGGAATAAACACCGGGGCGTTTCCACTGTT GGCTAAGGCAACTGCGGGAAGTTGCCCGGATGTTGCCAGGGCGATCCCCGCTGCCTATACGCGTTTTGATTTTGCGCAGC AACGTCTTGATATTAGCATTCCGCAGGCGGCGCTGATTGCCAGCGCCAGAGGATATATCCCGCCGCAATACTGGGATGAG GGTATTAACGCACTGTTATTGAATTACACGTTTACCGGGGCGAATAGCCGGGATCGCAGCGCAGACGACAGTGCGGAGAA CAGCTATTTTCTTGGACTAAATAGCGGCCTTAATCTGGGGGCCTGGCGGCTACGCGACTATTCCACATGGAACGCAAATA GCGGCGATCAGAATAGCAACAGTGACTGGCAGCACATCAGTACCTATCTGGAACGTGATGTGGCCTTTTGGCAGGGGGAA TTAACAGCAGGCGATAGCTATACCTCCGCCGCATTATTCGACAGCCTTCCTTTCCGCGGGCTACAGTTAGCGTCTGACGA TAATATGTTGCCAGACAGCATGAAGGGGTTCGCGCCGACTATTCACGGTATTGCCAAAAGCAACGCGCAAGTGAGCATCC GGCAAAATGGCTACATTATCAGCCAGCGTTATGTGCCGCCCGGTGCCTTTACTATCAATGATCTCTATCCCACTGCCGCC AGCGGCGATTTGACGGTTGAAGTCAAAGAGTCCGATGGCGCTATTAACCGTTATAACGTGCCTTATTCCGCAGTGCCTAT TCTGCAACGAGAAGGACGGGTGAAATACGCGGCCACAGTTGCTGAATATCGCGGTGATAGCAGCCAGAAAGAGAAGATAA AATTTGGCCAGGCAACCCTGATATGGGGGTTACCGCAGGGTTTTACGCTGTATGGCGGCACGCAACTTTCGAGTGATTAT CAGGCGCTGGCGATCGGTAGCGGTGCGAATTTAGGTGACTGGGGCGCAGTGTCGCTGGATGTGACGCAGGCCGCCAGTAC ACTGGCGGATGGCAGCACTCACCAGGGGCAATCGTTACGTTTCCTGTATGCCAAATCGCTTACGCAGTTGGGAACAAATT TTCAGCTACTGGGTTATCGCTATTCAACATCAGGATTTTATACGCTGGATGATACGGCGTGGAAACACATGAGTGGCTAT GACAATGACGATCGGACGGAGAGCGATAAGGCCAGGCCGGAATGGGCAGATTATTACAACCTGTACTATACCCGACGGGG TAAAGTACAGCTCGATATTAATCAGCAGTTAGGCGGGCTGGGATCGCTTTTTATTACTGGCAGTCAGCAAAGCTACTGGC ACACTGATGAAACGGATTCTTTGTTGCAGGTGGGGTACAGCGATACGCTGGCAGGCATTGCATGGAGCATTTCCTATAAC AACAACAAATCCGCAGGTGATTCGGCGCGCGATGAAATTTTTGCGTTGAATATCTCGGTGCCGCTAACTCAATGGCTGCA GCACGACGATGCCGTCACGCGCCATCACAATATTTACGCCACCTTTAGCACCAGCACGGACAAACAGCATAACGTCACGC AAAATGCGGGGCTTAATGGCACGTTACTGGATGAAAATAATCTTAGTTACAACATACAGAAAGGTTATCAGAATCAGGGT GTTGGCGAAAGCGGCTCCGCCAGCCTGGAATACGATGGGGCGAAGGGTAATGCCAACATTGGCTACAACGTGAGCGATAA CGGCAATTACCAGCAGGTGAATTATGGTCTGAGCGGCGGTCTGGTGGCGCATTCGCATGGAGTAACGCTAAGCCAACCGC TGGGCAATACCAATATCTTGATTGCCGCGCCAGGTGCAGCCAATGTCGGCGTTGTCGACCAGCCGGGTATTCACACGGAC AGGCGCGGTTATGCTGTGGTTCCGTATGCGACCACGTATCGCCAGAATCGTATAGCGCTCGATGTCAATGCAATGGCCGA TGATGTCGATATCGATGACGCAGTAACCCGTGTTGTGCCTACTGAGGGCTCGCTGGTTATGGCCCGCTTTAAAGCGCGAG TCGGCGCAAGAGCATTATTGACGCTGGATCATGAGGGTAAGCCGGTACCTTTTGGCGCGACGGTAACAGTGAACGATCGC CATGCGGAGGCGATCGTTGACGAGGCCGGGGAAGTTTATCTCTCCGGACTGGCAGCACAGGGTGTTCTGTATGCTCGCTG GGGTAACCTGCCGGATCAACACTGCGTCGCACACTATCAGCTTTCTTCCTCCCGTCAGACGCTGAGTCGACAACGTACGG AGTGTCATTAA Protein sequence : MLTGLALAMAWGPVSGRAENYFNPAFLSDDPSAVADLSTFSRNAQAAGTYRVDVYLNNTFLAAKDIAFLAVKTSGKGAKS DDSGLRACLTPEMLKSMGINTGAFPLLAKATAGSCPDVARAIPAAYTRFDFAQQRLDISIPQAALIASARGYIPPQYWDE GINALLLNYTFTGANSRDRSADDSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSNSDWQHISTYLERDVAFWQGE LTAGDSYTSAALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIAKSNAQVSIRQNGYIISQRYVPPGAFTINDLYPTAA SGDLTVEVKESDGAINRYNVPYSAVPILQREGRVKYAATVAEYRGDSSQKEKIKFGQATLIWGLPQGFTLYGGTQLSSDY QALAIGSGANLGDWGAVSLDVTQAASTLADGSTHQGQSLRFLYAKSLTQLGTNFQLLGYRYSTSGFYTLDDTAWKHMSGY DNDDRTESDKARPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDETDSLLQVGYSDTLAGIAWSISYN NNKSAGDSARDEIFALNISVPLTQWLQHDDAVTRHHNIYATFSTSTDKQHNVTQNAGLNGTLLDENNLSYNIQKGYQNQG VGESGSASLEYDGAKGNANIGYNVSDNGNYQQVNYGLSGGLVAHSHGVTLSQPLGNTNILIAAPGAANVGVVDQPGIHTD RRGYAVVPYATTYRQNRIALDVNAMADDVDIDDAVTRVVPTEGSLVMARFKARVGARALLTLDHEGKPVPFGATVTVNDR HAEAIVDEAGEVYLSGLAAQGVLYARWGNLPDQHCVAHYQLSSSRQTLSRQRTECH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 50 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_25 | YP_008320621.1 | Outer membrane usher protein SfmD | VFG0876 | Protein | 0.0 | 50 |
| A464_25 | YP_008320621.1 | Outer membrane usher protein SfmD | VFG0446 | Protein | 0.0 | 49 |
| A464_25 | YP_008320621.1 | Outer membrane usher protein SfmD | VFG1645 | Protein | 0.0 | 48 |
| A464_25 | YP_008320621.1 | Outer membrane usher protein SfmD | VFG0912 | Protein | 0.0 | 48 |
| A464_25 | YP_008320621.1 | Outer membrane usher protein SfmD | VFG0454 | Protein | 9e-158 | 43 |
