Gene Information

Name : A464_1540 (A464_1540)
Accession : YP_008322136.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Resistance
Product : Multiple antibiotic resistance protein MarA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1537755 - 1538138 bp
Length : 384 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCAGACGCAACACTGACGCTATTACTGTTCATAGCATTTTGGACTGGATCGAGGATAACCTGGAATCGCCGCTCTC
ACTGGAAAAAGTGTCTGAGCGTTCAGGATACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAGACCGGTCATTCAT
TAGGCCAATACATCCGCAGCCGTAAAATGACGGAAATCGCGCAAAAATTAAAAGAGAGCGACGAGCCTATTCTCTATCTG
GCGGAGCGCTACGGCTTTGAGTCACAGCAAACATTGACCCGGACGTTCAAAAACTATTTTGACGTGCCACCGCATAAATA
CCGAATCACCAATATACATGGCGAGTCACGGTATATACTGCCACTGAACCATGGCAATTGTTAG

Protein sequence : 
MSRRNTDAITVHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESDEPILYL
AERYGFESQQTLTRTFKNYFDVPPHKYRITNIHGESRYILPLNHGNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-20 42
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-20 42
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP001138.1.gene1637. Protein 2e-55 97
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA BAC0560 Protein 8e-53 94
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA NC_002695.1.917339.p Protein 8e-53 94
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP001918.1.gene2033. Protein 4e-52 93
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP000034.1.gene1596. Protein 1e-52 93
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP000647.1.gene1624. Protein 1e-51 92
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP001138.1.gene612.p Protein 1e-22 44
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA NC_010558.1.6276025. Protein 5e-21 42
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP001138.1.gene4488. Protein 4e-20 41
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP000034.1.gene4505. Protein 2e-19 41
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA BAC0371 Protein 1e-19 41
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA NC_002695.1.914293.p Protein 1e-19 41
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA CP001918.1.gene327.p Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA VFG1038 Protein 4e-21 42
A464_1540 YP_008322136.1 Multiple antibiotic resistance protein MarA VFG0585 Protein 3e-20 41