Gene Information

Name : A464_1435 (A464_1435)
Accession : YP_008322031.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1428102 - 1430615 bp
Length : 2514 bp
Strand : +
Note : -

DNA sequence :
ATGGATTTAAAAATGCTGGTACAAAAACTTAATCCGGTTTGTTTACGCGCCCTGGAGCAGGCAGCAGAACGCAGCCGGGC
GCAGGGCCACTGGTTCGTGGAGCCGGAACATTTGTTACTGGCGTTACTGGATGATGAGCATTGTGATTTCGTTTGCTGTC
TTAACGGCGCGGCGATCCCGGTTGACGCTCTGCGCGATGAGATCCTGCGCGCGCAGGGGCAGTTCAAAACAGGCTGTACG
CGGATGCCGGTATTTTCTTTGCAACTGGTTGAGTTGCTGGAGGGTGCCATTTTACAGGCGACCTTTCAGAATCATACCGA
GGTACGTTCCGCGCTGATATTGTTGGCATTACTGACTCGTGACCGCCTGCGCGTCCAACTGGCGCAGGGAATGCCGCTGC
TGTTGAAAATTCCCACTGAGATGCTGGAGAACCAATGGCGAGAGTGGTGCCGGGGAGCGGCGGAAGATGCGGCAAAACCG
GTAAAAGGCGAAACCCCACGGCATAGTGGCGGCGTGCTTGAACAATACACCCACGATCTGACCCGCGACGCGCGGGACGG
AAAGATTGACCCGATCATCGGGCGCGAGAGCGAGATCCGCCAGTGCATCGATATCCTGCTACGCCGTCGGCAGAACAACC
CGATTCTGGTCGGCGCGCCCGGCGTTGGGAAAACCGCCGTCGCCGAGGGACTGGCGCTGCGTATTGCCGAAGGCAAGGTA
CCGCCTCCCCTGCGCGAGGTGGTGTTACTTTCGCTCGATCTTGGCCTGCTACAGGCCGGTGCGGGCGTGAAAGGCGAGTT
TGAACAGCGTTTGCGCGGCGTGATCGAGGCGGTAAAAAAATCCCCGCAGCCGATTATTCTGTTTATCGACGAGGCCCATA
CGCTGATTGGCGCGGGCGGCGCCGAAGGCGGCAGCGACGCCGCTAACCTGCTGAAACCGGCGCTGGCGCGCGGCGAACTG
CGTACCATCGCCGCCACTACCTGGCAGGAGTATAAAAAATATTTCGAGAAAGATCCGGCTCTGGACCGCCGTTTCCAGCG
TATCCAGATTGAAGAGCCGGACGAGAACGGTGCGGTGGTGATGCTGCGGGCGGTGGCCGATAAACTGGAGGCGCATCACG
GCGTGCAAATTCTGGATACCGCCATCCGCGAGGCGGTGCGCCTCTCGCAGCGCTATATCTCTGGTCGCCAGTTGCCGGAC
AAAGCAATCAGCGTGCTCGATACCGCCTGCGCGCGGGTGGCGCTGGCGCAGCATGACGTGCCGCCCCAGCTGGAGGAGAT
CCGCCAGCATCTGGCGGCCATCGAGGAAGAGAGCGCGCGCCTGAACCGCGAACTGCTGGTGGGCGTCGATCATCACGACA
GGCTGTGCGAACTGGCGGCGCAGGCGGAAAAACTCCACCAGCAGGCGCGGGAGGTGGAGGAGCGCTGGCAGGATGAGCGC
CAGCGGGTCGGCGAGCTACAGGCAGCCCGCCAGCGGATGCTGGATCTCAGCGTGCGGCTGGAAGAAGACGATGAACTGGA
AGAGGAGCTGGTGGAGTGCGCGGCACTGATCGGCAAACTGGAAACCGCCGCCGCCCAGCTACGTGAGGAAGTGCCGCTGG
TGCCGGACTGCGTCGATCCCGCCACCGTGGCTTCAGTGATCAGCGGCTGGACCGGGATCCCGATAGGCCAGATGCAGACC
GATGAAGCCCACGCTCTGCGCACCCTGGTAGACCGGATGAGCGAGCGTGTGATGGGGCAGCAGATGGCGCTGGAGACTAT
CGCCCAGCGCCTGCGCGCCTACCGCAGCGGCCTGACCGATCCGCAAAAGCCGGTCGGCGTGTTCCTGCTGGTGGGGCCAA
CCGGTGTGGGCAAAACCGAAACTGCCTATGCGCTGGCCGACGCCCTCTACGGCGGCGAACGCAATCTGATCACCATCAAC
CTGTCTGAATATCAGGAGGCGCACACCGTCAGCCAGCTTAAAGGCGCGCCGCCGGGCTACGTTGGCTATGGTAGCGGCGG
GGCGTTAACCGAAGCGGTGCGCCGTCGGCCTTATTCGGTGGTGCTGCTCGACGAAATCGAAAAGGCACACCCGGACGTGC
TGGAGGCGTTTTATAACGTCTTCGACAAAGGGGTAATGGAAGACGGCACCGGGCTGATCGTTGATTTTAAAAACACAGTG
ATGCTGGCGACCAGCAACGTCGGCGCGGAATTAATTCTCGATACCCCGGTTAGTGAATTAAAGAGTGAGCGCTTTAACGA
GGCATTGCGCGAGGAGCTGTTGCGTCATTTCCGTCCGGCGTTTTTAGCAAGAATGACTACGGTGGCGTACCGGGCGTTAG
ATGAAGAAGTATTAAAAGGGATTGTGCTGGCGAAACTGGAGAAATTAGCTCAGCGGTATTTAGTGGCGACGGGGGAGAAG
TTGAATATTATAAATAATATAGCTTTAGATTTATCATTTTTTTCCAGGGCAGGGGATGTGAGAAATATAGAAAATATGCT
TATAAATAAAATCCTTGAAAAAAATAGAATTTAA

Protein sequence :
MDLKMLVQKLNPVCLRALEQAAERSRAQGHWFVEPEHLLLALLDDEHCDFVCCLNGAAIPVDALRDEILRAQGQFKTGCT
RMPVFSLQLVELLEGAILQATFQNHTEVRSALILLALLTRDRLRVQLAQGMPLLLKIPTEMLENQWREWCRGAAEDAAKP
VKGETPRHSGGVLEQYTHDLTRDARDGKIDPIIGRESEIRQCIDILLRRRQNNPILVGAPGVGKTAVAEGLALRIAEGKV
PPPLREVVLLSLDLGLLQAGAGVKGEFEQRLRGVIEAVKKSPQPIILFIDEAHTLIGAGGAEGGSDAANLLKPALARGEL
RTIAATTWQEYKKYFEKDPALDRRFQRIQIEEPDENGAVVMLRAVADKLEAHHGVQILDTAIREAVRLSQRYISGRQLPD
KAISVLDTACARVALAQHDVPPQLEEIRQHLAAIEEESARLNRELLVGVDHHDRLCELAAQAEKLHQQAREVEERWQDER
QRVGELQAARQRMLDLSVRLEEDDELEEELVECAALIGKLETAAAQLREEVPLVPDCVDPATVASVISGWTGIPIGQMQT
DEAHALRTLVDRMSERVMGQQMALETIAQRLRAYRSGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLITIN
LSEYQEAHTVSQLKGAPPGYVGYGSGGALTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGLIVDFKNTV
MLATSNVGAELILDTPVSELKSERFNEALREELLRHFRPAFLARMTTVAYRALDEEVLKGIVLAKLEKLAQRYLVATGEK
LNIINNIALDLSFFSRAGDVRNIENMLINKILEKNRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-126 47
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-113 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-113 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_1435 YP_008322031.1 ClpB protein VFG2084 Protein 4e-115 50
A464_1435 YP_008322031.1 ClpB protein VFG2076 Protein 2e-145 47