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Name : A464_140 (A464_140) Accession : YP_008320736.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Virulence Product : Type IV fimbrial assembly ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 148100 - 149485 bp Length : 1386 bp Strand : - Note : - DNA sequence : ATGAAAGACGCGCAGCTCAACACATTGTGCCAACGTCATCAGGCCGTACTGATGAACAGCGACAATAGCAGCATCTCCGT TGCAGTGGTCGATGCCCCCTCTCATGAATTACTCGACGCCTTGCATTTCGCCACGCAAAAACAGATCGATATTGTGTGCT GGACCCGCCAGCAAATGGAGAATCATTTACATAAGCCGCATCAGATGTCTTCGGTAAACACCGCGAAAGATGGAGAAACC GCCGCCCAACTTCTCAATCAGACATTACGCTCGGCAATGGCGAAACGCGCCTCCGATATTCATCTTGAACCCACCGCCAA CCGCTACCGGATAAGGCTCCGTATCGATGGCGTTCTGCATATTCTGCAGGATATCGCCAAAGAGAGGGGCATTGCGCTGA CGGCCAGATTGAAAGTTCTGGGAAATCTGGACATCGCCGAACACCGACTGCCACAGGACGGACAGTTTACCGTTGAACTT ACGGGCGACAGCATCTCTTTTCGTATCGCCACGCTTCCCTGTAAAGAAGGCGAAAAAGTCGTCTTACGTTTACTGCGTCA GGTTGATCAAACGCTGGCGCTGGACGCGCTGGGAATGCACACCGCACAATTTACCGCCTTTATGCAAGCCCTGCAGCAGC CTCAGGGACTGGTACTGGTGACGGGGCCCACCGGTAGCGGAAAAACAGTCACGTTATACAGCGCGCTACAAACCCGAAAT ACACCGGATATCAACCTCTGTAGCGTAGAAGATCCGATAGAGATTCCGCTGGACGGTATTAACCAGACGCAAATCCATCC TCGGGCCGGGCTCACCTTTCAAAATGTACTGCGCGCACTATTACGCCAGGATCCCGACATCATCATGGTGGGTGAAATTC GCGACGGTGACACCGCAGAAATCGCCATTAAAGCGGCGCAAACGGGCCATCTGGTACTTTCAACGCTACATACGAACTCC ACCAGCGAGACGCTAATACGCTTGCAACAGATGGGGGTAGCACGCTGGATGATTTCATCGGCGCTTACACTGGTAGTAGC GCAACGCCTGGTAAGAAAGCTGTGCCCACACTGCAAGCAGCGCCTGGATGATCCCGTGATACTGGCGCCTGCTCTCTGGC CCAGCGCGCTACCACGCTGGCAGGCAAGCGGCTGTCAGCATTGTTACCACGGCTTTTATGGTCGAACCGCGTTATTCGAA GTGCTAACCGTTACCCCGGCATTACGCCAGTTAATTGCCAGCGGCGCATCGGCGCAAGCACTGGAAACCCACCTCCAACA GACCGGTACAGGAACGCTTTTTGAAAATGGCTGTCGCGCCGTAGACCAAGGCATCACCTCCTTTGAAGAGATAGTACGCG TTCTGGGGATGCCCCATGACTGTTAA Protein sequence : MKDAQLNTLCQRHQAVLMNSDNSSISVAVVDAPSHELLDALHFATQKQIDIVCWTRQQMENHLHKPHQMSSVNTAKDGET AAQLLNQTLRSAMAKRASDIHLEPTANRYRIRLRIDGVLHILQDIAKERGIALTARLKVLGNLDIAEHRLPQDGQFTVEL TGDSISFRIATLPCKEGEKVVLRLLRQVDQTLALDALGMHTAQFTAFMQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN TPDINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNS TSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQRLDDPVILAPALWPSALPRWQASGCQHCYHGFYGRTALFE VLTVTPALRQLIASGASAQALETHLQQTGTGTLFENGCRAVDQGITSFEEIVRVLGMPHDC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-70 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-70 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A464_140 | YP_008320736.1 | Type IV fimbrial assembly ATPase PilB | VFG2048 | Protein | 4e-71 | 46 |
| A464_140 | YP_008320736.1 | Type IV fimbrial assembly ATPase PilB | VFG2426 | Protein | 1e-70 | 45 |
| A464_140 | YP_008320736.1 | Type IV fimbrial assembly ATPase PilB | VFG0182 | Protein | 5e-73 | 45 |
| A464_140 | YP_008320736.1 | Type IV fimbrial assembly ATPase PilB | VFG1876 | Protein | 1e-73 | 43 |
| A464_140 | YP_008320736.1 | Type IV fimbrial assembly ATPase PilB | VFG0233 | Protein | 3e-71 | 43 |
