Gene Information

Name : A464_1253 (A464_1253)
Accession : YP_008321849.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1277820 - 1279748 bp
Length : 1929 bp
Strand : +
Note : -

DNA sequence :
ATGCGGTTGTTTATTGCCGAAAAACCGAGCCTGGGACGCGCTATTGCGGATGTGCTGCCAAAGCCGCACCGTAAGGGGGA
CGGTTTTATTGAATGCGGAAACGGGCAGGTGGTCACCTGGTGTATTGGTCATTTGCTGGAGCAGGCGCAGCCTGACGCGT
ATGACAGCCGCTATGCGCGCTGGAGCCTGGCCGATCTGCCTATCGTACCCGAGAAATGGCAGCTTCAGCCTCGTCCTTCC
GTCACCAAACAGCTCAATGTGATTAAACGCTTTCTGCAAGACGCTGGTGAAATTGTTCATGCCGGCGACCCGGATCGTGA
AGGGCAGCTTCTGGTCGATGAAGTGCTGGACTATCTTCAACTTCCGGCCGAAAAGCGTCAGCGGGTGCAACGTTGTTTAA
TAAACGATCTTAACCCGCAGGCGGTGGAGCGTGCTATCGACAGACTGCGTGCGAACAGCGACTTTGTGCCGCTGTGCGTT
TCCGCGCTGGCGCGCGCGCGCGCGGACTGGCTGTATGGCATTAATATGACTCGCGCGTACACGATTCTGGGGCGTAATGC
GGGCTATCAGGGCGTGTTATCTGTGGGGCGTGTACAGACGCCGGTACTTGGCCTGGTGGTGCGCCGGGATGAAGAGATTG
AGAATTTCGTCGCCAAAGACTTCTTTGAAGTGAAGGCGCACATCGTTACGCCTGCCGACGAGCGTTTTACCGCTATCTGG
CAGCCGAGCGAGGCGTGTGAACCTTATCAGGATGAAGAGGGACGGTTGCTTCATCGTCCGCTGGCGGAACATGTGGTGAA
CCGGATCAACGGTCAGCCTGCGCTGGTAACCAGTTATAATGATAAACGGGAATCAGAATCCGCACCGTTACCTTTTTCGC
TCTCGACGTTACAGATTGAAGCGGCCAAACGCTTTGGTCTGAGCGCGCAAAATGTGCTTGATATTTGTCAGAAACTGTAT
GAAACCCACAAACTGATTACTTACCCACGTTCCGACTGCCGTTATCTGCCAGAGGAACATTTTGCCGGCCGCCACGCGGT
GATGAAGGCGATTAGCGTCCACGCCCCGGATTTACTGCCGCAGCCTGTGGTTAATCCTGATACGCGCAATCGCTGCTGGG
ATGACAAAAAAGTGGATGCGCACCACGCAATTATCCCGACGGCGCGCAGTTCTTCTGTCCACCTGACGGAAAATGAGGCG
AAGGTCTACGCCCTGATTGCGCGCCAGTATTTGATGCAGTTCTGTCCGGACGCGGTGTTTCGTAAATGTGTTATTGAGCT
GGACATTGCCAAAGGGAAATTTGTCGCCAAAGCGCGTTTTCTGGCGGAGGCCGGTTGGCGGACGTTACTGGGCAGTAAAG
AGCGCGACGAGGAGAACGACGGTACGCCGCTGCCGATTGTCGCGAAAGGAGATGAGTTACTGTGTGAAAAGGGCGAAGTG
GTTGAACGGCAAACTCAGCCGCCGCGCCATTTCACCGATGCGACATTACTGTCCGCGATGACCGGAATTGCCCGCTTTGT
GCAGGATAAAGATCTGAAAAAGATTCTGCGTGCGACCGATGGGCTGGGAACAGAAGCGACCCGTGCCGGGATTATTGAAC
TGCTTTTCAAACGTAGCTTTCTGACGAAAAAAGGGCGCTACATTCATTCGACCGATGCTGGAAAAGCGCTGTTCCATTCG
CTGCCAGAAATGGCGACTCGTCCGGATATGACGGCGCACTGGGAGTCTGTTCTGACGCAAATTAGCGAAAAACAGTGTCG
CTATCAGGATTTTATGCAGCCGCTGGTAGGCACACTGTATCAGTTGATCGAGCAGGCGAAACGGACGCCGGTACGCCAGT
TTCGCGGCATTATCGCCCCGGCGGGCGAAGGTAAGAAAAAAAGCGCGCCGCGTAAACGTCCGGCGAAAAAGAGCCCGCCC
CAGGCCTGA

Protein sequence :
MRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWSLADLPIVPEKWQLQPRPS
VTKQLNVIKRFLQDAGEIVHAGDPDREGQLLVDEVLDYLQLPAEKRQRVQRCLINDLNPQAVERAIDRLRANSDFVPLCV
SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW
QPSEACEPYQDEEGRLLHRPLAEHVVNRINGQPALVTSYNDKRESESAPLPFSLSTLQIEAAKRFGLSAQNVLDICQKLY
ETHKLITYPRSDCRYLPEEHFAGRHAVMKAISVHAPDLLPQPVVNPDTRNRCWDDKKVDAHHAIIPTARSSSVHLTENEA
KVYALIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPIVAKGDELLCEKGEV
VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRSFLTKKGRYIHSTDAGKALFHS
LPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIEQAKRTPVRQFRGIIAPAGEGKKKSAPRKRPAKKSPP
QA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 1e-107 41
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 1e-107 41
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 9e-108 41
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 2e-110 41