Gene Information

Name : M636_20510 (M636_20510)
Accession : YP_008317406.1
Strain :
Genome accession: NC_021848
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2644946 - 2645419 bp
Length : 474 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCGAACAATCACCTTCACTACCAAAAACAAAAGAAACATCAAGAAAATGAAATCCTAGAGCATGCTGCTGAAATCCT
AGCTAACCGCTACGTTCGAGGTAATGCCCTTTGTAACCCTGAAGCAACCAAAGAGTATGTTCGATTCAAACTAGCCAGCT
CGGAGCACGAGGTTTTCGCTCTGCTATTACTTGATAACCAACACCGTGTCATCGAGTTTAAATCACTCTTTAAAGGCACC
ATTGACTCCGCCAGCGTCTATCCGCGCGAGGTCGTCAAAAGCGTTTTGGAAGTAAATGCTGCGGCGGTCATTCTGGCGCA
TAACCACCCTTCTGGTGACCCTTCCCCATCTCAAGCGGATAGGCGTATCACACGCAAGCTTATCGACGCTTTAGCGTTAG
TGGATGTCAGGGTGCTTGACCATATCGTTGTAGGAGAAAGTAGTGTCTCGTTTGCAGAAAAGGGGTGGCTATGA

Protein sequence :
MSNNHLHYQKQKKHQENEILEHAAEILANRYVRGNALCNPEATKEYVRFKLASSEHEVFALLLLDNQHRVIEFKSLFKGT
IDSASVYPREVVKSVLEVNAAAVILAHNHPSGDPSPSQADRRITRKLIDALALVDVRVLDHIVVGESSVSFAEKGWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 2e-54 78
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-46 72
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-46 72
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-47 68
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 2e-22 53
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 2e-22 53
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-22 53
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 2e-22 53
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 1e-22 52
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 2e-22 52
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 2e-22 52
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 2e-22 52
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 2e-22 52
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 7e-22 52
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 3e-22 52
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 5e-22 52
unnamed AAL08475.1 unknown Not tested SRL Protein 3e-22 52
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 3e-22 52
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 2e-22 52
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-22 52
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 2e-22 52
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 3e-22 52
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 3e-21 51
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 4e-30 49
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 2e-24 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M636_20510 YP_008317406.1 hypothetical protein VFG1119 Protein 4e-47 72
M636_20510 YP_008317406.1 hypothetical protein VFG0660 Protein 6e-23 53
M636_20510 YP_008317406.1 hypothetical protein VFG1678 Protein 8e-23 52
M636_20510 YP_008317406.1 hypothetical protein VFG1528 Protein 1e-22 52
M636_20510 YP_008317406.1 hypothetical protein VFG1617 Protein 1e-22 52
M636_20510 YP_008317406.1 hypothetical protein VFG1066 Protein 1e-22 52