Gene Information

Name : M636_13610 (M636_13610)
Accession : YP_008316072.1
Strain :
Genome accession: NC_021848
Putative virulence/resistance : Virulence
Product : type III export protein pscF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1114492 - 1114740 bp
Length : 249 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCATTTTACGATGCGACCAACAGTGTAAACCTCGATGACGTTAAAACGAAACTTGAGCAACAAGCGAAAGACGCGAA
CAAATCCGTCACCGATGCCATTAAAAATCTAGAAACCAACGCGGACGACCCATCTAAGCTGGCTGAACTTCAGCACGCTA
TCAACAAATGGTCGGTGGTATACAACATCAACGCAACCACCACTCGTGCGATCAAAGATGTGATGCAGTCGATCCTGCAG
AAGGTGTAA

Protein sequence : 
MSFYDATNSVNLDDVKTKLEQQAKDANKSVTDAIKNLETNADDPSKLAELQHAINKWSVVYNINATTTRAIKDVMQSILQ
KV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscF AAO18031.1 LscF Virulence TTSS locus Protein 3e-16 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M636_13610 YP_008316072.1 type III export protein pscF VFG0214 Protein 5e-18 57
M636_13610 YP_008316072.1 type III export protein pscF VFG0405 Protein 3e-17 53