Gene Information

Name : M634_02665 (M634_02665)
Accession : YP_008312453.1
Strain :
Genome accession: NC_021847
Putative virulence/resistance : Virulence
Product : general secretion pathway protein D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 533972 - 535996 bp
Length : 2025 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAAACATTGGTTTAGCAAAAGTGCTTGGTTACTGGCAGGGAGTCTACTCTGCGTTCCAGGTGCTATGGCAAATGAATT
TAGTGCGAGTTTCAAAGGCACTGACATTCAAGAATTCATCAACATTGTTGGTCGTAACTTAGAAAAGACCATCATCGTTG
ACCCTTCGGTGCGCGGTAAAATCGACGTTCGCAGCTACGACGTGTTAAACGAAGAGCAATATTACAGCTTCTTCCTTAAC
GTGTTGGAAGTGTACGGCTATGCAGTCGTAGAAATGGACAACGGCGTACTCAAAGTCATCAAAGCAAAAGACTCTAAGAC
CTCTGCAATCCCTGTTATGGGGGATGGTAGCGCAAAAGGCGATAGCGTCATCACTCGCGTGGTTGCTGTGCGAAATGTCT
CTGTTCGTGAATTGTCACCGCTATTGCGCCAGCTGATTGATAACGCCGGGGCGGGTAATGTGGTTCATTACGATCCAGCT
AACATCATCCTGATCACCGGTCGTGCAGCGGTAGTAAACCGTCTAGCAGAAATCATCAAACGCGTTGACCAAGCTGGTGA
CAAAGAGATCGAGCTAGTAGAGCTTCGCAATGCCTCGGCTGCTGAAATGGTTCGTATCGTAGAAGCCCTGAACAAAACGA
CCAACCAAAAGAGCACGCCTGAGTTTCTTGAACCAAAAATCGTCGCGGATGAGCGTACGAACTCGATCCTGATTTCTGGC
GATCCGAAAGTACGTGCACGCCTGAAACGTTTGATTCGTCAACTTGACGTAGAAATGGCAACGAAAGGTAACAACCGAGT
GGTTTACCTTAAGTATGCAAAAGCAGAAGACCTAGTTGATGTACTGAAAGGTGTCTCTGACAACCTGCAAGCCGAAAAAC
AAGCGGGTCAAAAAGGTGCATCCAGTGCACAACGCGGTGAAGTCGTGATTGCGGCTCATGAAGCAACCAACTCACTTGTT
CTGACTGCGCCGCCAGATATCATGATGGCTTTGCAAGACGTAATTTCTCAATTAGATATTCGCCGTGCTCAGGTTCTGAT
TGAAGCCTTGATTGTTGAAATGTCCGAAGGTGATGGTATTAACCTAGGCGTTCAGTGGGGGTCACTAGAAACGGGTGCCG
TGATCCAGTACGGCAACACAGGTGCGCCAATCGGCCAAGTCATGGTTGGTTTGGAAGAAGCGAAAGACGTTACCAAAACG
GAAAGCTACTGGAATAGTGACACGAACAAGTGGGAAAACCGTCAGTACACTGAAGAAGGTGACTACTCAACACTTGCATC
TGCTCTTGGCGGCGTAAATGGTGCCGCAATGAGCATCGTGATGGGTGACTGGACGGCGCTAATTAGTGCGGTTGCTTCGG
ATTCCAACTCAAACATCCTGTCTTCTCCAAGTATCACTGTGATGGATAACGGCGAAGCCTCATTCATCGTGGGTGAGGAA
GTGCCTGTTATTACTGGCTCGACTGCTGGTTCAAACAACGACAACCCATTCCAAACCGTTGATCGTAAAGAAGTCGGTAT
CAAGCTAAAAGTTGTACCGCAGATCAACGAAGGTGACTCTGTTCAGCTAAATATTGAACAAGAAGTCTCTAACGTATTGG
GTGCTAATGGTGCCGTTGACGTTCGTTTCGCTAAGCGCCAGCTTAACACTTCCGTGATGATCCAAGATGGCCAGATGCTG
GTGCTAGGTGGCTTGGTTGATGAACGTGCACTAGAAAGTGAATCGAAAGTGCCACTGCTTGGTGATATTCCAGTATTGGG
TCACTTGTTCAAATCAACCAGTACACAAACTCAGAAGCGCAATTTGATGGTCTTCATTAAGCCAACCATCATCCGTGATG
GTATGACCGCAGACGGTATCACTCAACGTAAATACAACTTTATTCGTGCCGAGCAACTGTACAAGGCTGATCAAGGTTTG
AAGTTAATGTCGGACGATAAAATTCCTGTAATGCCTGCATTTGGCCAAGATCGTAAGCATCCTGCTGAAATCCAAGCGTT
TATCGATCAAATGGAAAAGAACTAA

Protein sequence :
MKHWFSKSAWLLAGSLLCVPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEEQYYSFFLN
VLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVMGDGSAKGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPA
NIILITGRAAVVNRLAEIIKRVDQAGDKEIELVELRNASAAEMVRIVEALNKTTNQKSTPEFLEPKIVADERTNSILISG
DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQKGASSAQRGEVVIAAHEATNSLV
LTAPPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDGINLGVQWGSLETGAVIQYGNTGAPIGQVMVGLEEAKDVTKT
ESYWNSDTNKWENRQYTEEGDYSTLASALGGVNGAAMSIVMGDWTALISAVASDSNSNILSSPSITVMDNGEASFIVGEE
VPVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLGANGAVDVRFAKRQLNTSVMIQDGQML
VLGGLVDERALESESKVPLLGDIPVLGHLFKSTSTQTQKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKADQGL
KLMSDDKIPVMPAFGQDRKHPAEIQAFIDQMEKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspD CAE85234.1 GspD, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-162 55
gspD YP_854407.1 type II secretion protein GspD Not tested PAI I APEC-O1 Protein 3e-169 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M634_02665 YP_008312453.1 general secretion pathway protein D VFG2047 Protein 1e-158 54