Gene Information

Name : M634_13595 (M634_13595)
Accession : YP_008314572.1
Strain :
Genome accession: NC_021847
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2816025 - 2816894 bp
Length : 870 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGACAAAGGGTAATCCAATCCGTCTGCTTTTTAGCACTTTGGTGCTACTGGTTGGCGTGCTGTTTTCTTCATTTTCGTT
TGCTGAGGCAGAGGAATCACCGCTGCCTGCGAATTTAGCAGAAGGGAGCAGTGTGACGGTTCAGGCCATGCAAAGCGATA
CCGGAGCCAGTCGCTCTATGTCGGTTGGCAATGGTGCTGGTATTCCAGCTTTCACCATGACCACCAATCCGGATGGTAGT
GAAGACTATTCTGTTACGTTGCAAATTCTCGCCTTAATGACTATGCTGGGCTTCTTGCCAGCAATGGTGATTTTGATGAC
GTCTTTCACCCGAATTGTGGTGGTAATGTCGATTCTGCGTCAGGCGATGGGCTTACAACAAACACCATCGAATCAGGTGA
TCATTGGCATCGCGCTTTTCTTGACCTTCTTTGTCATGTCTCCTGTACTCAACGAAATCAATGACACGGCTATCCAGCCA
TACCTCAACGAACAAGTGACAGCGCGCGAAGCATTCGATGCAGCGCAAGTGCCGATGAAGGCCTTCATGCTTAAGCAAAC
GCGCATTAAGGATTTGGAAACCTTCGTAAATATGTCGGGCGAGCAAGTAACCAATCCAGAAGATGTATCGATGGCGGTGT
TGATTCCCGCTTTTATCACCTCGGAGCTGAAAACGGCGTTCCAAATCGGTTTCATGTTGTTTCTGCCGTTCTTGATCATC
GACTTGGTGGTGGCATCGGTTTTGATGGCCATGGGTATGATGATGCTATCGCCAATGATTGTATCGCTACCGTTTAAGTT
GATGCTGTTTGTGTTGGTGGATGGTTGGAACTTGATATTGTCGACCTTAGCCGGCAGTTTTGCCCTTTAG

Protein sequence :
MTKGNPIRLLFSTLVLLVGVLFSSFSFAEAEESPLPANLAEGSSVTVQAMQSDTGASRSMSVGNGAGIPAFTMTTNPDGS
EDYSVTLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSPVLNEINDTAIQP
YLNEQVTAREAFDAAQVPMKAFMLKQTRIKDLETFVNMSGEQVTNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLII
DLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-26 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 7e-27 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 7e-27 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M634_13595 YP_008314572.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-64 67
M634_13595 YP_008314572.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-59 64
M634_13595 YP_008314572.1 flagellar biosynthesis protein FliP VFG2494 Protein 9e-54 57
M634_13595 YP_008314572.1 flagellar biosynthesis protein FliP VFG2338 Protein 7e-47 51