Gene Information

Name : M634_00980 (M634_00980)
Accession : YP_008312151.1
Strain :
Genome accession: NC_021847
Putative virulence/resistance : Virulence
Product : lysine decarboxylase CadA
Function : -
COG functional category : -
COG ID : -
EC number : 4.1.1.18
Position : 194143 - 196278 bp
Length : 2136 bp
Strand : -
Note : constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAATATTTTCGCTATCTTGAACCACATGGGTGTGTTCTTTAAAGAAGAGCCAGTTCGTCAACTTCACGCTGCTCTTGA
GAAAGCGGGCTACGAAGTGGTTTACCCAGTAGATGATAAAGACTTGATCAAAATGATTGAGATGAACCCACGCATTTGCG
GTGTGCTGTTCGACTGGGATAAATACTCACTAGAGCTATGTGAACGTATTAGCCAAATCAACGAAAAACTGCCTGTTCAC
GCATTTGCTAACGAACAGTCTACTCTCGATATTTCACTAACAGACCTACGTCTAAACGTGAGCTTCTTCGAGTACGCTTT
AGGTATGGCTGACGACATCGCTATCAAAATCAACCAAGCGACCGAGGCATACAAAGATGCCATCATGCCTCCATTCACTA
AAGCGCTATTCAAATACGTAGAAGAAGGTAAATACACCTTCTGTACTCCAGGTCACATGGGCGGCACTGCATTCCAGAAA
AGCCCTGCTGGTAGCATCTTCTACGATTTTTACGGTCCAAACACATTTAAAGCGGACGTATCAATCTCAATGCCTGAGTT
AGGTTCTCTACTAGACCACTCAGGTCCACATAAAGATGCAGAAGAATACATCGCACGTACCTTCAATGCAGACAGTTCTT
ACATCGTAACTAACGGTACGTCTACATCGAACAAAATCGTGGGCATGTACTCAGCACCTGCGGGCAGCACAGTACTGATT
GACCGTAACTGTCACAAATCTCTGACTCACCTAATGATGATGAGCGACGTGACACCAATCTACTTCCGTCCAACTCGTAA
CGCATACGGCATCCTTGGTGGTATTCCACAAAGCGAATTCAGCCGCGATGTCATTGCAGAGAAAGTGGCGAAAACACCTG
GTGCAACAGCGCCAAGTTACGCAGTAGTGACTAACTCAACTTACGATGGTCTGTTGTACAACACACAATTCATCAAAGAG
TCGCTAGACTGTAAACACATCCACTTCGACAGTGCTTGGGTGCCTTACACTAACTTCAACCCAATTTACGAAGGTAAATG
TGGTATGAGTGGTGAAGCGATGCCAGGCAAAGTGTTCTACGAGACACAATCAACACACAAACTGTTGGCAGCGTTCTCAC
AAGCTTCAATGATTCACGTGAAAGGTGACTTTGATAAAGAGTCTTTCAACGAAGCATTCATGATGCACACTTCAACTTCA
CCTCAGTACGGCATTGTTGCTTCTACTGAAACTGCAGCGGCAATGATGCGCGGCAACACAGGTAAGAAGTTGATGCAAGA
CTCTATCGATCGCGCAATTCGCTTCCGTAAAGAGATCAAACGCCTAGAAGCAGAAAGTGACAGCTGGTTCTTCGATGTAT
GGCAACCAGAAAACATCGATACCACAGAATGTTGGAAACTAGACCCTAGCGATACATGGCACGGCTTCAAGAACATGGAT
GACAACCACATGTATCTTGACCCAATCAAAGTAACGCTACTGACTCCGGGGATGAATAAAGAAGGCGAACTAGAAGAATC
AGGTATTCCTGCTTCGCTGGTGGCTAAATTCCTAGACGAGCGCGGCATCGTGGTTGAGAAAACAGGCCCATACAACTTGT
TGTTCCTATTCTCAATCGGTATCGACAAATCAAAAGCAATGCAATTACTACGCGGTCTGACTGAATTTAAACGTGGCTAC
GACTTGAACCTAACCATCAAGAGCTTCCTTCCTTCGCTATATAACGAAGATCCAAGCTTCTATGAAGGCATGCGCGTTCA
AGAATTGGCACAAGCAATTCATGACCTAACTAAGAAATACAACCTACCAGAGCTAATGTACAAAGCGTTCGATGTTCTTC
CAGAAATGAAAGTAACACCACACGCAGCATGGCAAGAAGAGCTTCGCGGTAACGTAGAAGAAATCAAACTGGAAGAAATG
GTTGGTCGCGTAAGTGCGAACATGATCCTTCCTTATCCTCCAGGTGTGCCACTAGTACTTCCTGGTGAAATGGTGACTCA
AGAGTCTCGCCCTGTGCTGGACTTCCTAGAGATGCTTTGTGAGATCGGTGCGCATTACCCAGGTTTCGAAACCGATATCC
ACGGTCTGTACCAACAAAAAGATGGTAGCTACACCGTAAAAGTATTGAAGAACTAA

Protein sequence :
MNIFAILNHMGVFFKEEPVRQLHAALEKAGYEVVYPVDDKDLIKMIEMNPRICGVLFDWDKYSLELCERISQINEKLPVH
AFANEQSTLDISLTDLRLNVSFFEYALGMADDIAIKINQATEAYKDAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQK
SPAGSIFYDFYGPNTFKADVSISMPELGSLLDHSGPHKDAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFSRDVIAEKVAKTPGATAPSYAVVTNSTYDGLLYNTQFIKE
SLDCKHIHFDSAWVPYTNFNPIYEGKCGMSGEAMPGKVFYETQSTHKLLAAFSQASMIHVKGDFDKESFNEAFMMHTSTS
PQYGIVASTETAAAMMRGNTGKKLMQDSIDRAIRFRKEIKRLEAESDSWFFDVWQPENIDTTECWKLDPSDTWHGFKNMD
DNHMYLDPIKVTLLTPGMNKEGELEESGIPASLVAKFLDERGIVVEKTGPYNLLFLFSIGIDKSKAMQLLRGLTEFKRGY
DLNLTIKSFLPSLYNEDPSFYEGMRVQELAQAIHDLTKKYNLPELMYKAFDVLPEMKVTPHAAWQEELRGNVEEIKLEEM
VGRVSANMILPYPPGVPLVLPGEMVTQESRPVLDFLEMLCEIGAHYPGFETDIHGLYQQKDGSYTVKVLKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 76
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M634_00980 YP_008312151.1 lysine decarboxylase CadA VFG1670 Protein 0.0 64