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Name : clpB (STAIW_v1c03370) Accession : YP_008311292.1 Strain : Spiroplasma taiwanense CT-1 Genome accession: NC_021846 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATPase subunit ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 327664 - 329811 bp Length : 2148 bp Strand : + Note : - DNA sequence : ATGGATTTTTTACAAAAACCAGATCCTTTAAATGATCCAGAGATTTTAAGTAAATATACTAGAGATCTTACATTGGATGC AAAAGAAGGAAAAATTGATCCAATCATTGGACGTGATGATGAAATAATGAGAGTAATAAGAATTTTAAGTAGAAAAACCA AAAATAATCCTGTTTTAATTGGTGAACCAGGAGTAGGTAAGACTGCAATTGCAGAAGGTCTTGCACAAAGAATAAATAAA GGCGATGTTCCCAGTGTTTTAAAAAATAAAAAAATTTTAGAACTAGATATGGGTAGTGTTATGGCTGGAGCTAGTTTTTT AGGTGATTACGAAGCAAGAATTAAAGGAATTATTAATGCAATTCAAAAAGAAAATGGGGAAATTATCCTATTTATTGATG AATTACATTTAATTGTTGGTGCTGGAAAAACAGGAAATGGTGGAGGAATGGATGTTTCAAATTTACTAAAACCTGCTCTA GCGAGAGGTGGAATTAAAGTAATTGGGGCAACAACTTTAAAAGAATATAGAGAGTATATTGAAAAAGATGCTGCTTTGGA GAGAAGATTTCAAAAAGTTTATGTTTCAGAACCAACTATTGATGAAACCATTTCAATTTTAAGAGGTTTAAAAGAGAGAT TTGAAACTTATCACGGAGTTAGAATTCATGATAATGCTCTTGTTGCAGCAGCTCAATTAAGTGATAGATATATTTCAGAT AGATTTTTACCAGATAAAGCTATTGATTTAGTGGATGAAGCAAGTGCAACAATTAAAACAGAACTTGCTTCTGTTCCAAC GGAGTTATATCAAATTGATAGAAAAGTTATGCAACTTGAAATTGAGAGAGCTGCTCTTTCACAAGAAAAAGATGATAAAT CAAAAGAAAAACTTCAAATTTGTGAAAAAGAATTAGTTAGTTTTAAAATAAAACAAAAAGAACTTAATGATAAGTGAGAT GAAGAAAAGACACTTTTATCAAAAATAAATCAATTTAGATCAACAATTGATGGCTTGAAAATTGAATTAGAGCAAGCACA AAATGAAGGAAATTATCAAAGGGCTGGGGAAATTCAATATTCTTTGCTTCCTGCATTAGAGAAAAAATTGAATAATGCTT TGAGTGAAAACGCAGAGAAATTAATATCTGAAGAGGTAAGTGAAAATGAAATTGCATCAATTATTGCAAAGTGAACAGGG ATTCAAATAGAAAATTTAATGGAATCAGAAATTCAAAAATTACTTGGATTGAGCACTACCTTAAAAAGAATGGTAAAGGG ACAAAATGAAGCAATTGAGTTAGTTGCTGATGCAATAATGAGGAGCCGTAGTGGAATAAAAGACCCAAGTAAACCAATAG GTAGTTTTCTATTTTTAGGACCAACAGGAGTTGGTAAAACTGAAGTAGCAAAATCATTAGCAAAAAATTTATTTGGAAGT GAGAAAAAAATGATTAGGTTTGATATGTCTGAATATATGGAAAAACATTCAGTTTCAAAACTAATTGGTTCTCCACCAGG TTATGTTGGTTATGAAGAAGGGGGAAGATTAACTGAAGCAATTCGTCGTGCTCCCTATTCAATTATTCTATTTGATGAGG TGGAAAAAGCTCACCCAGATGTTTTTAATATTTTTTTACAAATATTTGATGACGGAAGAATTACAGATTCATTAGGTAAA ACAGTTGATTTTAAAAATACCATTATTATAATGACTTCAAATATTGGTTCAGAGTACTTAATGTCAACTCCATCAGAATT AATTAATCAAGAAGTAATTGATGAACAATTAAAAAAATTTTTTAGACCAGAATTTTTAAATAGAATTGATAATATTATTA ACTTTAATCCATTATCAAAAGACAATATAAAAGAAATTATTGTAAAAACTTTAAATGAATTAAAAGAAAGAGTTTTTGAA AAAAATGAATTTATTATTAATTTCACAAATCAAACAATTAAAAAAATTTTAGATGAAGGATTTAGTAAGGAATATGGTGC AAGACCAATAAAAAGATATATTGAAAAAAATATAGAGACTTTAATTGCTAGAGCAATTGTGGCAGAAGATATTGAACCAA AAAGAAATTATGTTATTGATGTCGAAAATGATATTTTTAGAATAACTAATTCAAATAAATTAAATTAG Protein sequence : MDFLQKPDPLNDPEILSKYTRDLTLDAKEGKIDPIIGRDDEIMRVIRILSRKTKNNPVLIGEPGVGKTAIAEGLAQRINK GDVPSVLKNKKILELDMGSVMAGASFLGDYEARIKGIINAIQKENGEIILFIDELHLIVGAGKTGNGGGMDVSNLLKPAL ARGGIKVIGATTLKEYREYIEKDAALERRFQKVYVSEPTIDETISILRGLKERFETYHGVRIHDNALVAAAQLSDRYISD RFLPDKAIDLVDEASATIKTELASVPTELYQIDRKVMQLEIERAALSQEKDDKSKEKLQICEKELVSFKIKQKELNDKWD EEKTLLSKINQFRSTIDGLKIELEQAQNEGNYQRAGEIQYSLLPALEKKLNNALSENAEKLISEEVSENEIASIIAKWTG IQIENLMESEIQKLLGLSTTLKRMVKGQNEAIELVADAIMRSRSGIKDPSKPIGSFLFLGPTGVGKTEVAKSLAKNLFGS EKKMIRFDMSEYMEKHSVSKLIGSPPGYVGYEEGGRLTEAIRRAPYSIILFDEVEKAHPDVFNIFLQIFDDGRITDSLGK TVDFKNTIIIMTSNIGSEYLMSTPSELINQEVIDEQLKKFFRPEFLNRIDNIINFNPLSKDNIKEIIVKTLNELKERVFE KNEFIINFTNQTIKKILDEGFSKEYGARPIKRYIEKNIETLIARAIVAEDIEPKRNYVIDVENDIFRITNSNKLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-106 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_008311292.1 | ATP-dependent Clp protease, ATPase subunit ClpB | VFG2084 | Protein | 2e-114 | 41 |
| clpB | YP_008311292.1 | ATP-dependent Clp protease, ATPase subunit ClpB | VFG2076 | Protein | 4e-116 | 41 |
