Gene Information

Name : SEEB0189_04935 (SEEB0189_04935)
Accession : YP_008307340.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : antitoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 938785 - 939105 bp
Length : 321 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGCAGTAATGTCACATGGGGACTGCAGCGGGATATCACGCCGCGCCTGGGAGCCCGTCTGGTACAGGAGGGCAACCG
GCTACACTATCTGGCTGACCGGGCAAGCATCACTGGTAAATTAAGTGACGCCGAATGCCGGAGGCTGGATGAAACATTCC
CGCACTTTATCAGTCAGATGGAGTCGATGCTGACCACTGGTGAAATGAATCCCCGCCATGCCCACTGCGTCACCCTGTAC
CACAATGGTTTTACCTGCGAAGCCGATACCCTTGGCAGTTGCGGCTACGTATACATCGCTGTTTATCCCAGTCAACGCTA
A

Protein sequence :
MSSNVTWGLQRDITPRLGARLVQEGNRLHYLADRASITGKLSDAECRRLDETFPHFISQMESMLTTGEMNPRHAHCVTLY
HNGFTCEADTLGSCGYVYIAVYPSQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-27 68
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 1e-27 68
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 4e-28 67
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 9e-28 67
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 3e-28 67
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 3e-28 67
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 2e-28 67
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 4e-27 66
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-26 66
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-26 65
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-26 65
unnamed AAL08477.1 unknown Not tested SRL Protein 2e-26 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_04935 YP_008307340.1 antitoxin VFG1619 Protein 4e-28 67
SEEB0189_04935 YP_008307340.1 antitoxin VFG0662 Protein 9e-29 67
SEEB0189_04935 YP_008307340.1 antitoxin VFG1681 Protein 8e-27 66
SEEB0189_04935 YP_008307340.1 antitoxin VFG1068 Protein 8e-27 63