Gene Information

Name : SEEB0189_04905 (SEEB0189_04905)
Accession : YP_008307334.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 935900 - 936349 bp
Length : 450 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAGAAGCTGAAATGCGTTCTCTCAGTTTGCGCTCTGAGCCTTTGCCTGCTGTCACCGGCTCAGGCCGAAGAACAGCG
TTACATCAGTATCCGTAATACCGACATGGTCTGGGTGCCGGGCAATATCTGCGTCTGGCAGTTTCGCCTGGACAACGGCG
GAAGTGGTGAAGGGTTCGGGCCTTTGACACTCTCCCTGCGTCTGAAAGATAAAGGGGGATACACGCTGGCGATGGGGAAT
ATGGCGGTGGCTGCATTTGGCGACAGCGATGCCACTCGCTCTCAGGAAGCCTCGCTGGAGAACGAATGCGTGGAAAACGT
CAACTCGGTCGAAATCATGAAGGCAACGGAAGAGCGTAATGGTTACCAGATTGACCTGCCACTGTCCGTTTTCGACCCGC
AGTATTACCGACCGATACAAGTCACGGTTGTCGGTGGTAATGCATCTTAG

Protein sequence : 
MKKLKCVLSVCALSLCLLSPAQAEEQRYISIRNTDMVWVPGNICVWQFRLDNGGSGEGFGPLTLSLRLKDKGGYTLAMGN
MAVAAFGDSDATRSQEASLENECVENVNSVEIMKATEERNGYQIDLPLSVFDPQYYRPIQVTVVGGNAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3197 NP_838481.1 hypothetical protein Not tested SHI-1 Protein 5e-31 65
SF2993 NP_708767.1 hypothetical protein Not tested SHI-1 Protein 5e-31 65
unnamed AAK00476.1 unknown Not tested SHI-1 Protein 8e-31 64
unnamed AAW51752.1 Aec69 Not tested AGI-3 Protein 1e-30 64
unnamed ADD91706.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 1e-30 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_04905 YP_008307334.1 hypothetical protein VFG0657 Protein 1e-31 65