Gene Information

Name : SEEB0189_04890 (SEEB0189_04890)
Accession : YP_008307331.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 934141 - 934845 bp
Length : 705 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGTCCCAGACTGAGCGTCGCCATGAGCGGCTGGCGGTTCGGCTGTCCCTCATTATCAGCCGCCTTGTTGCTGGCGAAAC
ACTGGATATGGGCCTTCTTGCTGCAGAGTTTGGTGTATCGCTCCGTACCCTCCGCCGGGATTTTCGTGAGCGACTGATGT
ACCTGGACCTGGAATATCGCAATGGCACCTGTCGTCTGCTCTCAGGAAGCCATCAACGCGAACTGACTGTACTGACTTTT
GTTCGTCAGTCAGGCGTGGAGGCTTTGTTTCCTGATATGGATAACCACATGGCCAGCTCACTTCTGAGTGGACCTGGTGA
GTCTCCGTGCCTCATATGGGCAGAGTCGGAGTCATTGTCGCCACCCAGGCCAGGCATATTTACACGCCTTGTCAGGGCCA
TATCAGAGCATCGCCGTGTGACACTGCTGGCTGAAGGTTGTCGCTGTTCAGGGCTTGCACCATACCGCCTCGTACTCTGT
GGCGGGCACTGGTATCTGACTGGAGAGCATCATCATCGCGTGGCAGTGTTTCCGCTAAACGATATCCATGCAGTTACCTT
GCACCCGGAACTGTTCGTGCCTGACCTTCAGATTCGCAATGTTCTCGCCGAACCTGAGTTCCTCAGAGCTCTTCCCCATT
TTCACGTTTTTCACTCACTGCTCGCCAGAACCGGCGACTGTCTTTTACCTCATAAGGAATCATGA

Protein sequence : 
MSQTERRHERLAVRLSLIISRLVAGETLDMGLLAAEFGVSLRTLRRDFRERLMYLDLEYRNGTCRLLSGSHQRELTVLTF
VRQSGVEALFPDMDNHMASSLLSGPGESPCLIWAESESLSPPRPGIFTRLVRAISEHRRVTLLAEGCRCSGLAPYRLVLC
GGHWYLTGEHHHRVAVFPLNDIHAVTLHPELFVPDLQIRNVLAEPEFLRALPHFHVFHSLLARTGDCLLPHKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 8e-41 42
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-40 42
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 5e-41 41
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 2e-40 41
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 1e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_04890 YP_008307331.1 transcriptional regulator VFG1613 Protein 6e-41 41
SEEB0189_04890 YP_008307331.1 transcriptional regulator VFG1523 Protein 3e-41 41