|
Name : xerD (SEEB0189_04670) Accession : YP_008307288.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 887599 - 888495 bp Length : 897 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGAACAGGATTTAGCGCGTATTGAGCAGTTTCTGGATGCCCTGTGGCTGGAACGAAATCTGGCGGAAAATACATTAAG CGCGTATCGTCGCGATTTATCGATGGTCGTTGCGTGGTTGCATCATCGCGGAAAAACGCTTGCGACGGCGCAGGCTGATG ATTTACAAACGCTGCTGGCTGAACGGGTGGAGGGCGGATACAAAGCGACCAGCTCCGCACGCCTGTTAAGCGCTATGCGG CGCTTTTTCCAGCATCTGTACCGTGAAAAGTATCGTGAGGATGATCCGAGCGCGCAGTTGGCCTCGCCTAAGCTTCCGCA GCGTTTACCGAAAGACCTTAGCGAGGCGCAGGTTGAGCGGCTCTTGCAGGCGCCGCTTATTGATCAACCTTTGGAGTTGC GCGATAAAGCTATGCTGGAAGTGCTGTATGCCACCGGTTTGCGCGTGTCGGAACTGGTGGGGCTGACAATGAGCGATATC AGTCTGCGGCAGGGCGTGGTGCGGGTTATCGGTAAAGGCAATAAAGAGCGGTTGGTGCCGTTAGGCGAAGAGGCGGTATA TTGGCTGGAAACGTATCTGGAGCATGGGCGTCCCTGGTTACTCAATGGCGTATCGATTGACGTATTGTTCCCCAGCCAGC GTGCGCAGCAGATGACGCGGCAGACCTTCTGGCACCGTATTAAACATTATGCGGTACTGGCTGGAATCGATAGCGAAAAA CTATCGCCGCATGTTTTACGTCACGCTTTCGCCACGCATTTGCTGAATCACGGCGCCGACTTGCGCGTTGTACAAATGCT ACTTGGGCATAGCGATCTTTCGACGACACAAATTTATACGCATGTCGCAACGGAGCGTTTGCGTCAACTTCATCAACAGC ACCATCCGCGGGCATGA Protein sequence : MEQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGYKATSSARLLSAMR RFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 6e-62 | 54 |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 6e-62 | 54 |
