Gene Information

Name : SEEB0189_21165 (SEEB0189_21165)
Accession : YP_008310505.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4362986 - 4363618 bp
Length : 633 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGAAGACGAAAGTAATCCGTGGCCTAGTTTTGTTGATACATTCTCTACGGTATTGTGTATTTTTATATTTCTTATGTT
GGTGTTTGCACTTAATAATATGATTATTATGTATGACAACTCAATTAAAGTTTATAAAGCAAATATAGAGAATAAGACTA
AATCTACTGCTCAAAATAGCGGAGCCAATGACGATTCAAATCCTAATGAAATAGTTAATAAGGAAGTGAATACTCAAGAT
GTGTCGGACGGAATGACTACAATGTCAGGTAAGGAGGTTGGAGTATACGATATCGCCGATGGTCAGAAAACTGATATAAC
GTCTACAAAAAATGAGCTTGTTATTACGTATCATGGCAGGCTGAGAAGCTTTTCAGAAGAGGATACTCATAAAATAAAGG
CTTGGTTAGAAGACAAAACTAATAGTAATTTATTGATAGAAATGGTTATTCCTCAGGCAGACATCTCTTTCTCTGACTCT
TTACGACTGGGATATGAACGGGGAATTATTTTAATGAAAGAGATTAAGAAAATATATCCTGATGTAGTTATTGACATGAG
TGTTAACTCCGCAGCATCAAGTACAACGAGTAAAGCTATTATCACGACTATTAATAAAAAGGTGTCAGAGTGA

Protein sequence :
MEDESNPWPSFVDTFSTVLCIFIFLMLVFALNNMIIMYDNSIKVYKANIENKTKSTAQNSGANDDSNPNEIVNKEVNTQD
VSDGMTTMSGKEVGVYDIADGQKTDITSTKNELVITYHGRLRSFSEEDTHKIKAWLEDKTNSNLLIEMVIPQADISFSDS
LRLGYERGIILMKEIKKIYPDVVIDMSVNSAASSTTSKAIITTINKKVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STM4257 NP_463122.1 hypothetical protein Not tested SPI-4 Protein 7e-83 99
siiA CAE11793.1 putative inner membrane or exported protein Virulence SPI-4 Protein 5e-83 99
SC4136 YP_219123.1 hypothetical protein Not tested SPI-4 Protein 1e-82 98
STY4452 NP_458554.1 putative exported protein Not tested SPI-4 Protein 5e-83 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_21165 YP_008310505.1 membrane protein VFG0577 Protein 2e-83 99