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Name : SEEB0189_19270 (SEEB0189_19270) Accession : YP_008310138.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 3957679 - 3960300 bp Length : 2622 bp Strand : - Note : involved in fimbria production; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCGTAATCAGCTTTTCATGACGCGATATTACTCCAGCGTAACTAAACCCGTATTAACCCCGCTGGCGTTGGCTATCGC ATTGGCGCCTGCGCCGGGGTGGGCGGAAAACTATTTCAACCCGGCATTTCTGTCTGACGACCCGTCTGCGGTGGCCGACC TATCGACCTTTTCCCGTAATGCCCAGGCGGCGGGGATGTATCGCGTTGACGTTTACCTGAACAATACGTTTCTCGCGACC AGAGACATTGCCTTCCAGGCGGTGAAAACGACGGGAAAAAGCGCGCCCACCGATGACAGCGGATTACGCGCCTGCCTGAC GCCTGAAATGCTTAAAAATATGGGGGTAAACACCGGGGCGTTTCCACGGTTGGCGAAGGCGGCGGCGGGAAGTTGCCCGG ATCTCGCCAGTGCGATACCGGCCGCCCGGACCCGCTTTGATTTTGCGCAGCAACGTCTCGACATTAGCATCCCGCAGGCG GCGATGGTTGCCAGCGCCAGAGGCTATATCCCACCGCAATACTGGGATGAAGGTATTAACGCGTTGCTATTGAATTACAC CTTTACCGGCGCGAATAGTCAGGATCGGAGCCCAGGCGGCAGTACGGAGAACAGCTATTTTCTTGGATTGAATAGCGGCC TTAATCTGGGGGCCTGGCGGTTACGCGACTACTCCACATGGAACGCGAATAGCGGCGATCAGAATAGCGACAGCGACTGG CAGCACATCAGTACTTATCTGGAACGTGATGTGGTCTTTTTGCAGGGAGAACTGACGGCAGGCGATAGTTATACCCCCTC CGCATTATTCGACAGCCTTCCTTTTCGCGGGCTACAACTGGCGTCTGACGACAATATGTTGCCAGACAGCATGAAGGGCT TCGCGCCGACCATTCACGGCATTGCCAGAAGCAACGCGCAAGTGACCATTCGGCAAAACGGCTACATCATTAATCAGCGC TATGTGCCGCCCGGGGCATTTACTATTAATGATCTCTATCCTACCGCCGCCAGCGGCGATTTGACTGTGGAAGTCAAAGA GTCCGACGGTTCTATTAATCGTTATAACGTGCCCTATTCCGCCGTGCCGATTCTACAACGAGAAGGGCGGCTGAAGTATG CGGCGACGGTGGCGGAGTATCGCAGCGATAGTAGTCAAAAAGAGAAGGTGAAATTCAGTCAGGCGACCTTGATATGGGGG TTACCGCATGGTTTTACGCTGTATGGCGGAACACAACTTTCCAGTCATTATCACGCGCTGGCGATCGGCAGCGGCGCAAA TCTGGGCGACTGGGGCGCGGTGTCGCTGGATGTCACCCAGGCTACCAGTACGCTGGCGGATAATAACACCTACCAGGGGC AATCGCTGCGTTTCCTGTATGCCAAATCGCTTGCACAGTCAGGAACCAATTTACAGCTTATGGGCTATCGCTATTCAACC TCGGGCTTTTACACGTTGGATGATACCACGTGGAAACGGATGAGCGGCTATGACGATGACAGTCGGACTGACAGCGATAA AAGCAGGCCGGAATGGGCGGATTATTACAACCTTTATTACACCAGGAGGGGGAAAGTACAACTCGATATCAATCAACAGC TAGGCGGGTTGGGATCGCTTTTTATTACCGGCAGCCAGCAAAGTTATTGGCACACTGATGAAAAGGATTCTTTGTTGCAG GTGGGATACAGCGATACGCTGGCGGGGATTGCATGGAGCGTTTCTTACAACAATAACAAATCCGCAGGCGATGCGGAGCG CGATCAAATTTTCGCGCTGAATATCTCGGTGCCGCTAAGTCAATGGCTGCAACACGATGATGAAGTCACGCGCCATCACA ATGTTTACGCTACCTTTAGCACCAGTACGGACAAACAGCATAACGTTACGCAGAATGCGGGCCTTAGCGGCACACTGCTG GACGAAAACAATCTTAGTTACAACATACAGCAAGGTTATCAGAATCACGGTATTGGCGAAAGCGGCGCCGCCAGTCTGGA ATACGATGGCGCGAAAGGCAACGCCAACATTGGCTATAACGTTAGCGATAACGGCGATTACCAGCAGGTGAATTATGGCC TGAGCGGCGGCCTGGTGGCGCACGCGCATGGAGTGACACTAAGCCAGCCGCTGGGCAATACCAATATTTTGATTGCCGCG CCGGGCGCAGCCAACGTCGGCGTTGTCGACCAGCCGGGTATTCATACGGACGCGCGTGGCTATGCGGTGGTGCCGTATGC GACAACATATCGCCAAAACCGTATGGCGCTGGACGTTAACGCCATGGCTGATGATGTCGATATTGATGACGCGGTGACTC GCGTTGTGCCGACCGAAGGCGCGCTGGTTCTGGCCCGCTTTAAAGCGCGGGTCGGCGCGCGTGCCCTGGTAACGCTGAAT CATAACGGTAAGCCTGTACCCTTTGGCGCAACGGTGACGGTGAATGATCGCCATGCGGAGGCGATTGTTGACGAGGCCGG GGAAGTCTATCTTTCCGGGTTGTCAGCGCAAGGCGTTCTGCACGTTCGCTGGGGGAACCTGCCGGATCAACAGTGTGTCG CGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTGAGTCGACAACATGCGGAGTGTCATTAA Protein sequence : MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPRLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA AMVASARGYIPPQYWDEGINALLLNYTFTGANSQDRSPGGSTENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHDDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLL DENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLN HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 51 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEB0189_19270 | YP_008310138.1 | outer membrane usher protein | VFG0876 | Protein | 0.0 | 52 |
| SEEB0189_19270 | YP_008310138.1 | outer membrane usher protein | VFG1645 | Protein | 0.0 | 50 |
| SEEB0189_19270 | YP_008310138.1 | outer membrane usher protein | VFG0912 | Protein | 0.0 | 50 |
| SEEB0189_19270 | YP_008310138.1 | outer membrane usher protein | VFG0446 | Protein | 3e-178 | 49 |
| SEEB0189_19270 | YP_008310138.1 | outer membrane usher protein | VFG0454 | Protein | 3e-163 | 43 |
