Gene Information

Name : araD (SEEB0189_18885)
Accession : YP_008310061.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 3868407 - 3869102 bp
Length : 696 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAAGATCTCAAACGCCAGGTATTGGAAGCCAATCTGGCGCTGCCAAAACACAACCTGGTCACCCTTACCTGGGG
TAACGTCAGCGCCGTCGATCGCGAACGCGGCGTACTGGTGATTAAGCCGTCCGGCGTCGATTATAGCGTCATGACCGCTG
ACGATATGGTGGTGGTCAGCCTGGAGACCGGTGAAGTCGTTGAAGGTCATAAGAAACCGTCGTCCGATACGCCAACCCAC
CGTCTGTTGTACCAGGCATTTCCGACTATCGGCGGCATCGTACACACCCATTCGCGCCACGCGACTATCTGGGCGCAGAC
GGGTCAGCCGATTCCGGCGACGGGAACCACCCATGCTGACTATTTCTACGGTACGATTCCCTGCACTCGCAAAATGACCG
AGGCGGAAATTAATGGCGAGTATGAATGGGAAACGGGCAATGTCATTGTTGAAACCTTTGAAAAACAAGGCATTGACGCC
GCTCAAATGCCCGGCGTGCTTGTCCATTCGCACGGCCCGTTTGCCTGGGGTAAAAATGCCGAGGATACAGTGCATAACGC
CATCGTGCTGGAAGAAGTGGCCTATATGGGGATCTTCTGCCGCCAGCTTGCGCCGCAGTTGCCCGACATGCAGCAATCCC
TGCTGGATAAACACTATCTACGCAAACATGGCGCAAAAGCCTATTACGGGCAGTAA

Protein sequence :
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVLVIKPSGVDYSVMTADDMVVVSLETGEVVEGHKKPSSDTPTH
RLLYQAFPTIGGIVHTHSRHATIWAQTGQPIPATGTTHADYFYGTIPCTRKMTEAEINGEYEWETGNVIVETFEKQGIDA
AQMPGVLVHSHGPFAWGKNAEDTVHNAIVLEEVAYMGIFCRQLAPQLPDMQQSLLDKHYLRKHGAKAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 7e-61 57