Gene Information

Name : SEEB0189_18345 (SEEB0189_18345)
Accession : YP_008309953.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3747010 - 3747807 bp
Length : 798 bp
Strand : -
Note : part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCAGGAAAACCAAATTCATTCCGATACCACCTTTGCGCTGCGAAGCGTCGCCTTTCGTGTGCCGGGCCGCACGCTTTT
ACACCCTCTCTCGTTAACGTTTCCCGCAGGTCGCGTCACCGGACTTATCGGTCATAATGGTTCCGGTAAATCCACGCTGT
TAAAAATGCTGGGCCGCCATCAGCTGCCTTCCGAAGGGGATATTCTGCTCGACAATCAGCCGCTGGCGAGCTGGAGCAGC
AAGGCGTTTGCCCGCAAAGTTGCCTATCTGCCTCAACAATTGCCACAGGCGGAAGGAATGACGGTGCGCGAACTGGTGGC
GATTGGCCGCTATCCGTGGCACGGCGCGCTGGGACGCTTTGGCGTCGCGGACCGGGAAAAAGTAGACGAGGCGATTACGC
TGGTCGGCTTAAAACCGCTGGCGCATCGTCTGGTAGACAGTCTTTCCGGCGGCGAGCGCCAGCGCGCGTGGATTGCCATG
CTGGTCGCGCAGGACAGCCGTTGTCTGCTGCTGGATGAGCCGACGTCAGCGCTGGATATCGCCCATCAGGTGGACGTGCT
GGCGCTGGTGCATCGCTTAAGCCAGCAGCGCGGGCTGACGGTGGTTGCGGTGCTGCACGATATCAACATGGCGGCCCGCT
ACTGTGATTATTTAGTCGCGCTACGCGGCGGTGAAATGATTGCGCAAGGAACGCCTGCGGAACTGATGCGCAGTGACACG
CTGGAGAAGATTTACGGTATCCCGATGGGTATCCTTCCGCATCCGGCGGGCGCGGCACCTGTGAGTTTTGTGTATTAA

Protein sequence : 
MQENQIHSDTTFALRSVAFRVPGRTLLHPLSLTFPAGRVTGLIGHNGSGKSTLLKMLGRHQLPSEGDILLDNQPLASWSS
KAFARKVAYLPQQLPQAEGMTVRELVAIGRYPWHGALGRFGVADREKVDEAITLVGLKPLAHRLVDSLSGGERQRAWIAM
LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQQRGLTVVAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRSDT
LEKIYGIPMGILPHPAGAAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-44 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-42 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-45 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-38 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-38 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-38 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_18345 YP_008309953.1 iron-hydroxamate transporter ATP-binding protein BAC0164 Protein 6e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_18345 YP_008309953.1 iron-hydroxamate transporter ATP-binding protein VFG0925 Protein 1e-44 44
SEEB0189_18345 YP_008309953.1 iron-hydroxamate transporter ATP-binding protein VFG1042 Protein 6e-45 43