Gene Information

Name : SEEB0189_17925 (SEEB0189_17925)
Accession : YP_008309876.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3664553 - 3665011 bp
Length : 459 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACCACAGCAATTAACCCTGAACTTATCCCTGCGCCTGATGAAACCCTCATCACCGCCACGCCCGTACCGGATGAGGA
CCGCCCTGACTTCTGGCCCCGCCACTTCCGGGGCGTTCCGCAGTGGATATTACTGGAGCCCCGTATCTTCGCCTGGACGG
ACCGCCTGTGCGCGGACTACAGCGGCGGTATCTGGCAGTTTTACACGCTGAGCAACGGTGGCGCATTTATGGCCCCGGAG
GCGGATGACGGGGACGACACCTGGTCACTGTTCAACGCCATGAACGGCAACAGCGCGGACATGAGCCCTGAGGCGGTCGG
GATCACCGCCTGCCTGCTGGAGTACAGCCACCATGCCTGCCGTACCGGCAGCGACCTGATGACCGCGCATTACCTCCACC
TGCGGGATCATACCCTTAACCATCCTGAATGCAGCGCCATCATGCATATCACCGACTGA

Protein sequence :
MTTAINPELIPAPDETLITATPVPDEDRPDFWPRHFRGVPQWILLEPRIFAWTDRLCADYSGGIWQFYTLSNGGAFMAPE
ADDGDDTWSLFNAMNGNSADMSPEAVGITACLLEYSHHACRTGSDLMTAHYLHLRDHTLNHPECSAIMHITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 4e-41 66
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 4e-41 66
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 3e-41 66
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 4e-41 65
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 6e-45 63
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-46 63
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 2e-44 62
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 3e-42 62
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-45 62
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 3e-42 62
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 7e-46 62
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 1e-41 61
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 7e-46 61
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 6e-43 61
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-40 60
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-40 60
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-40 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_17925 YP_008309876.1 hypothetical protein VFG0659 Protein 1e-41 66
SEEB0189_17925 YP_008309876.1 hypothetical protein VFG1677 Protein 5e-47 63
SEEB0189_17925 YP_008309876.1 hypothetical protein VFG1527 Protein 3e-46 62
SEEB0189_17925 YP_008309876.1 hypothetical protein VFG1616 Protein 3e-46 61