Gene Information

Name : SEEB0189_17910 (SEEB0189_17910)
Accession : YP_008309873.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3662520 - 3662759 bp
Length : 240 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCCAGACTGTACATCACTTTTATTGCCTGAAGGCGAAGGCCCTTTCTCACGCACGCAGGCGATTGCCGTCACAACAGC
TTACCGCAATGTGTTTATTGAAGATGACCAGGGCACACATTTCCGGCTGGTCATACGCGACAGTTATAATCAGTTGCTCT
GGTGGGCATGGAATTTTGAAGCCCGTGCCTGGTACTGGCTGAACCGCTATCTGCTCAGCCACGGAATACCCCGACACTGA

Protein sequence :
MPDCTSLLLPEGEGPFSRTQAIAVTTAYRNVFIEDDQGTHFRLVIRDSYNQLLWWAWNFEARAWYWLNRYLLSHGIPRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 3e-17 69
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 3e-18 68
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-18 68
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-17 66
unnamed AAL67351.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-08 56
unnamed CAI43842.1 hypothetical protein Not tested LEE Protein 2e-08 51
aec70 AAW51753.1 Aec70 Not tested AGI-3 Protein 2e-08 51
ykfF ADD91705.1 YkfF Not tested PAI-I AL862 Protein 2e-08 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_17910 YP_008309873.1 hypothetical protein VFG1525 Protein 1e-18 68