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Name : SEEB0189_16570 (SEEB0189_16570) Accession : YP_008309608.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : outer membrane usher protein FimD Function : - COG functional category : - COG ID : - EC number : - Position : 3373490 - 3376102 bp Length : 2613 bp Strand : - Note : involved in the export and assembly of fimbrial subunits FimA; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAGAAGACAACCTGGTTTGCAGGGCGATTTCCCGGCTATGTATCACCGTTAAGCGGCGTGGCGCTGTCGGTGTTGGC AGCTCTGTGTCCGCTGACGAGCCGCGGCGAAAGTTATTTCAACCCTGCGTTTTTGTCGGCGGATACCGCGTCCGTGGCGG ATTTATCTCGCTTTGAAAAAGGTAATCATCAGCCTCCCGGTATTTACCGGGTGGATATCTGGCGTAACGACGAATTCGTA GCGACGCAGGATATTCGTTTTGAGGCGGGCGCCGTGGGCGCCGGCGATAAATCCGGCGGCCTGATGCCTTGTTTTACACC GGAGTGGATTAAACGGCTGGGCGTGAATACCGCGACGTTCCCTGTCTCAGATAAAGGCGTCGATACCACGTGTATTCACC TTCCTGAGAAAATCCCGGGCGCGGAGGTCGCGTTCGATTTCGCGTCGATGCGCTTAAATATTAGCTTGCCGCAGGCGTCA TTGCTCAACAGCGCGCGTGGCTATATCCCGCCGGAAGAGTGGGATGAAGGGATACCCGCCGCACTCATTAATTACAGTTT TACCGGTAGCCGCGGAACAGACAGCGATAGCTATTTTTTGAGTCTGCTGAGCGGGTTGAACTATGGCCCCTGGCGGCTGC GTAATAACGGAGCCTGGAACTATTCGAAAGGGGATGGCTATCATTCGCAACGCTGGAACAACATTGGCACCTGGGTACAG CGCGCCATCATTCCGCTAAAAAGCGAACTGGTCATGGGGGACAGCAATACCGGGAACGATGTTTTCGACAGCGTCGGCTT TCGCGGAGCGCGGCTGTACTCTTCTGACAATATGTATCCCGATAGCCTGCAGGGCTACGCCCCCACGGTCAGAGGGATCG CCCGGACGGCGGCAAAGCTGACGATACGACAGAACGGGTATGTTATCTACCAAAGCTATGTGTCGCCGGGCGCGTTTGCG ATTACCGATCTTAATCCTACCTCTTCCAGCGGCGACCTTGAGGTGACGGTAGATGAAAAAGACGGTAGCCAACAACGTTA CACGGTGCCTTACTCTACCGTTCCGCTATTGCAGCGTGAGGGCAGGGTGAAGTATGACCTGGTGGCCGGGGATTTTCGCA GCGGCAATAGTCAGCAGTCTTCGCCATTCTTTTTCCAGGGAACGGTGATTGCCGGCCTGCCTGCGGGGCTGACGGCTTAC GGCGGTACGCAACTTGCCGATCGTTACCGTGCCGTAGTGGTCGGGGCGGGGCGAAATTTGGGCGACTGGGGTGCCGTGTC GGTCGATGTCACACATGCGCGTAGCCAACTGGCAGGTGACAGCACCCATCAGGGGCAATCGTTGCGTTTTCTGTACGCTA AATCGCTAAATAATTACGGGACTAATTTTCAATTGCTGGGTTACCGCTATTCCACACGCGGATTTTACACCCTGGATGAT GTGGCATACCGCAGTATGGAAGGGTACGACTACGAATACGATAGCGACGGACGCCGCCATAAAGTGCCGGTGGCGCAGAG CTACCACAATCTCCGCTACAGCAAAAAAGGCCGCTTTCAGGTCAATATTTCGCAAAATCTGGGGGATTACGGGTCACTGT ATCTTTCCGGCAGTCAACAAAATTACTGGAATACGGCGGATACCAATACCTGGTATCAACTGGGATACGCCAGTGGATGG CAAGGCATAAGTTATTCGCTGTCATGGTCGTGGAACGAATCGGTGGGGATCTCAGGCGCCGACCGCATTCTGGCATTCAA TATGTCCGTTCCGTTTAGCGTTCTGACCGGACGGCGCTATGCGCGCGACACTCTTCTTGATCGTACTTATGCCACGTTTA ACGCCAACCGCAACCGCGACGGCGACAATAGCTGGCAGACCGGCGTGGGCGGCACGCTTCTGGAAGGACGTAATCTGAGC TACAGCGTGACGCAGGGGCGTAGCAGTACCAATGGTCATAGCGGCAGCGCCAGCGCTAGCTGGCAGGCGACGTATGGCAC GCTGGGCGTGGGATATAACTACGATCGCGATCAGCATGACTATAACTGGCAACTTTCCGGCGGCGTGGTCGGTCATGCGG ATGGTATTACGTTTAGCCAACCGTTGGGCGATACCAATGTCTTGATTAAAGCGCCGGGAGCGAAAGGCGTGCGCATCGAA AACCAGACCGGCGTGAAAACGGACTGGCGGGGCTATGCGGTAATGCCCTACGCCACGGTATATCGCTATAACCGCGTCGC GTTAGATACCAACACGATGGACAACCATACCGATGTCGAAAATAACGTCAGCAGCGTAGTGCCGACAGAGGGCGCGCTGG TGCGGGCTGCTTTTGATACGCGGATAGGCGTAAGGGCAATCATTACCGCGAGGCTTGGCGGACGTCCGTTACCGTTTGGC GCGATAGTACGAGAAACCGCCAGCGGCATTACCAGTATGGTCGGCGATGACGGGCAAATTTATCTGAGCGGCTTGCCGCT AAAAGGTGAACTGTTCATCCAGTGGGGAGAGGGGAAAAACGCGCGTTGTATCGCCCCTTACGCCCTGGCGGAGGATAGCC TGAAGCAGGCGATTACGATAGCCAGCGCGACCTGTATCCGTCCGTCGTCATAA Protein sequence : MKKTTWFAGRFPGYVSPLSGVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFV ATQDIRFEAGAVGAGDKSGGLMPCFTPEWIKRLGVNTATFPVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQAS LLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQ RAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFA ITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAY GGTQLADRYRAVVVGAGRNLGDWGAVSVDVTHARSQLAGDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQNYWNTADTNTWYQLGYASGW QGISYSLSWSWNESVGISGADRILAFNMSVPFSVLTGRRYARDTLLDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLS YSVTQGRSSTNGHSGSASASWQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIE NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIITARLGGRPLPFG AIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIAPYALAEDSLKQAITIASATCIRPSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 49 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 2e-178 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEB0189_16570 | YP_008309608.1 | outer membrane usher protein FimD | VFG0446 | Protein | 0.0 | 99 |
| SEEB0189_16570 | YP_008309608.1 | outer membrane usher protein FimD | VFG0876 | Protein | 0.0 | 49 |
| SEEB0189_16570 | YP_008309608.1 | outer membrane usher protein FimD | VFG1645 | Protein | 1e-178 | 48 |
| SEEB0189_16570 | YP_008309608.1 | outer membrane usher protein FimD | VFG0912 | Protein | 1e-178 | 48 |
| SEEB0189_16570 | YP_008309608.1 | outer membrane usher protein FimD | VFG0454 | Protein | 2e-155 | 41 |
