Gene Information

Name : SEEB0189_16255 (SEEB0189_16255)
Accession : YP_008309546.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3309767 - 3311002 bp
Length : 1236 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGTCGGTTTATAAAGTTCCGCTCGAGCAAAATGTTCTGGAAGCGGCTCAAGAGCGTATAATGTGGACCCTGGAAACCTT
ACCCCGGGTCTGCGTCTCATTTTCTGGTGGTAAAGATTCAGGACTTATGTTGCACCTGACGGCAACGTTGGCGCGCAAAA
TGAATAAAAAGATCCATGTTCTCTTCATTGACTGGGAAGCGCAATTCTCCTGTACCATCGCCTATATTGAATCGTTACGT
GAATACTACGCGGACGTTATTGAGCGTTTTTATTGGGTCGCATTACCCTTAACCACACAAAATTCCCTTTCACAATACCA
GCCGGAGTGGCAGTGTTGGCAGCCGGGTACCGACTGGGTACGACAACCGCCAGAAGATGCGATTACCGATCCGGCCTTTT
TTTCCTTTTATCAACACGGCATGACCTTTGAACAGTTCGTTCGCGATTTTGCCGACTGGTTTTCAGAAAAACGTCCTGCC
GCTATGCTGGTCGGTATTCGTTCCGACGAATCCTATAACCGATTTGCCGCTATCGCTAACTCGCATAAGCTGCGCTTTGC
CGACGATAAGCCCTGGACCACGTTAGCCCCTAAGGGGCACACCTGGTATATCTATCCCATCTATGACTGGAAAACCGCAG
ATATCTGGACCTGGTTCGCCAAAACAGGTAAACCATGTAACCCTTTGTATAATTTGATGTATCAGGCTGGAGTACCGCCC
CGTTACATGCGTATTTGCGAACCGTTCGGCCCGGAACAACGACAGGGGTTATGGCTGTATCATGTTATCGAACCTGAGCG
CTGGGCGGCCATGTGCGCCAGAGTCAGCGGCGCACTCAGCGGAGGAATATACGCCGGACAAGACAGCCATTTTTACGGCC
ACCGGAAAATTTTAAAACCCGCTCACCTTAACTGGGAAGAGTACGCGCTGCTCCTGCTACACAGTATGCCTGAAGTCACT
GCCGAACATTACCGTAATAAAATCGCCGTTTATTTGCAGTGGTATAAGAAAAAAGGCATGCACACCATTCCACAAACGCA
GCATGACGATATCGGATCGCGCGATATTCCGTCGTGGCGACGGATCTGCAAAGTATTACTGAACAATGATTACTGGTGCC
GGGCGCTGTCATTCAGTCCGACAAAACCTAAGAATTACCAGCGTTATAACGAACGTATGAAAGCTAAACGCCAGGAATGG
GGGATCTTATGCAACACCGACTCACAACCGAAATAA

Protein sequence : 
MSVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLR
EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGTDWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA
AMLVGIRSDESYNRFAAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGALSGGIYAGQDSHFYGHRKILKPAHLNWEEYALLLLHSMPEVT
AEHYRNKIAVYLQWYKKKGMHTIPQTQHDDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEW
GILCNTDSQPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-126 61
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-126 61
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 1e-124 61
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 4e-125 61
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-126 61
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 4e-124 60
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 1e-124 60
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 1e-124 60
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-125 59
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 1e-125 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_16255 YP_008309546.1 hypothetical protein VFG1504 Protein 2e-124 60