Gene Information

Name : SEEB0189_14070 (SEEB0189_14070)
Accession : YP_008309126.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradative operon repressor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2848357 - 2848797 bp
Length : 441 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

ATGCATGATTCATTAACCATCGCATTGCTTCAGGCGCGCGAAGCGGCAATGACCTATTTCCGCCCCATCGTTAAAAGCCA
CAATCTGACCGACCAGCAATGGCGCATTGTGCGAATCCTGGCCGATAGCCCCTCTATGGATTTTCACGAGCTGGCCTTTC
GTTCCTGCATTTTGCGTCCAAGTCTGACCGGAATATTGACGCGCATGGAGCGAGACGGACTGGTGTTGCGACTCAAGCCG
GTTAACGATCAGCGTAAGTTATATGTCATGTTGACGGAGCAGGGACAAACGTTGTACGCCCGTGCCCGAAGCCAGGTAGA
AGAGGCTTATCGAAAAATTGAGGCCGATTTCACGCCCGAAAAAACACAGCAATTGATGCTGCTGCTGGACGATCTTATTG
CTCTGGGACGCCAGCATCCTGATAGCGAAGCGGAAGCATAG

Protein sequence :

MHDSLTIALLQAREAAMTYFRPIVKSHNLTDQQWRIVRILADSPSMDFHELAFRSCILRPSLTGILTRMERDGLVLRLKP
VNDQRKLYVMLTEQGQTLYARARSQVEEAYRKIEADFTPEKTQQLMLLLDDLIALGRQHPDSEAEA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hpcR	AAO17176.1	HpcR	Not tested	tcd island	Protein	4e-43	72

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SEEB0189_14070	YP_008309126.1	homoprotocatechuate degradative operon repressor	BAC0505	Protein	4e-33	56