|
Name : potB (SEEB0189_13445) Accession : YP_008309002.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Unknown Product : putrescine/spermidine ABC transporter permease Function : - COG functional category : - COG ID : - EC number : - Position : 2724826 - 2725689 bp Length : 864 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAGAACACAAGTAAATTCCAGAATGTAGTGATTGTCACTATCGTCGGTTGGCTTGTGTTATTTGTTTTTCTGCCCAA CCTGATGATCATTGGCACCAGCTTTCTGACCCGTGACGACGCCAGTTTCGTCAAGATGGTCTTTACGCTGGATAACTACG CGCGCCTGCTCGATCCGCTCTATTTTGAAGTGCTCCTGCACTCTCTGAATATGGCGCTGATCGCCACCCTCTCCTGCCTG GTGCTGGGCTATCCTTTTGCCTGGTTTCTGGCGAAGTTACCGGAAAAGATACGTCCGTTATTGCTGTTTTTGCTGATTGT TCCTTTCTGGACCAACTCACTGATCCGCATCTATGGGCTGAAAATATTCCTGAGCACTAAAGGTTATCTCAATGAATTCC TGCTGTGGCTGGGCGTGATTGATACACCGATTCGCATCATGTTCACCCCGAGCGCCGTTATTATCGGCCTGGTTTACATT TTGCTGCCATTTATGGTCATGCCGCTCTACTCCAGCATTGAGAAGCTCGACAAACCACTACTGGAGGCCGCACGCGATCT CGGCGCCAGTAAAATGCAAACGTTCATCCGCATCATTATTCCATTAACCATGCCGGGCATTGTCGCCGGTTGCCTGCTCG TGATGCTACCGGCAATGGGCCTGTTCTACGTCTCCGATTTAATGGGTGGCGCGAAAAACCTGCTGATTGGTAACGTCATT AAGGTACAGTTCCTGAATATTCGCGATTGGCCGTTTGGCGCGGCTACCAGTATTACGCTGACCATTGTGATGGGACTCAT GCTGTTGATTTACTGGCGGGCTTCCCGCTTATTGAATAAGAAGGTGAGTGATATAAGCGATTAA Protein sequence : MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYARLLDPLYFEVLLHSLNMALIATLSCL VLGYPFAWFLAKLPEKIRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI LLPFMVMPLYSSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVI KVQFLNIRDWPFGAATSITLTIVMGLMLLIYWRASRLLNKKVSDISD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 3e-122 | 98 |
