Gene Information

Name : SEEB0189_12555 (SEEB0189_12555)
Accession : YP_008308826.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone SsaE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2546193 - 2546435 bp
Length : 243 bp
Strand : -
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; involved in the secretion of SseB; Derived by automated computational analysis using gene prediction me

DNA sequence :
ATGACAACTCTGACCCGGTTAGAAGATTTGCTGCTTCATTCGCGTGAAGAGGCCAAAGGCATAATTTTACAATTAAGGGC
TGCCCGGAAACAGTTAGAAGAGAACAACGGTAAGTTAAAGGATCCGCAGCAATATCAGCAAAACACCTTATTGCTTGAAG
CGATCGAGCAGGCCGAAAATATCATCAACATTATTTATTATCGTTACCATAACAGCGCACTTGTAGTGAGTGAGCAAGAG
TAA

Protein sequence :
MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGKLKDPQQYQQNTLLLEAIEQAENIINIIYYRYHNSALVVSEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaE AAC28877.1 putative secretory apparatus component Virulence SPI-2 Protein 1e-19 99
ssaE CAA12183.1 SsaE Virulence SPI-2 Protein 1e-19 99
ssaE NP_460361.1 secretion system effector Virulence SPI-2 Protein 2e-19 99
ssaE NP_456132.1 putative secretion system protein Virulence SPI-2 Protein 3e-19 98
ssaE NP_805067.1 secretion system protein Virulence SPI-2 Protein 3e-19 98
ssaE YP_216404.1 secretion system effector protein SsaE Virulence SPI-2 Protein 5e-19 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_12555 YP_008308826.1 type III secretion system chaperone SsaE VFG0497 Protein 5e-20 99