Gene Information

Name : SEEB0189_12550 (SEEB0189_12550)
Accession : YP_008308825.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone SseA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2545604 - 2545927 bp
Length : 324 bp
Strand : -
Note : chaperone for SseB and SseD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAAAAA
ATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGGGCAGAGAGCCCCAAAAAGAGCAGAGAGACAGAGA
GTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTAAGT
TTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAAAAG
GTAA

Protein sequence : 
MIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKKSRETESILHNLFPQGVAGVNQEAEKDLKKIVS
LFKQLEVRLKQLNAQAPVEIPSGKTKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseA YP_216405.1 secretion system effector protein SseA Virulence SPI-2 Protein 2e-45 100
sseA NP_456131.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-45 100
sseA NP_805068.1 pathogenicity island protein Virulence SPI-2 Protein 2e-45 100
sseA AAC28878.1 SseA Virulence SPI-2 Protein 2e-45 99
sseA CAA12184.1 SseA Virulence SPI-2 Protein 2e-45 99
sseA NP_460362.1 secretion system chaperone protein Virulence SPI-2 Protein 3e-45 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_12550 YP_008308825.1 type III secretion system chaperone SseA VFG0498 Protein 1e-45 99