Gene Information

Name : SEEB0189_12505 (SEEB0189_12505)
Accession : YP_008308816.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : type III secretion system needle protein SsaG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2539779 - 2539994 bp
Length : 216 bp
Strand : -
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGATATTGCACAATTAGTGGATATGCTCTCCCACATGGCGCACCAGGCAGGCCAGGCAATTAATGACAAAATGAATGG
TAATGATTTGCTCAACCCAGAATCGATGATTAAAGCGCAATTTGCCTTACAGCAGTATTCTACATTTATTAATTACGAAA
GTTCACTGATCAAAATGATCAAGGATATGCTTAGTGGAATCATTGCTAAAATCTGA

Protein sequence : 
MDIAQLVDMLSHMAHQAGQAINDKMNGNDLLNPESMIKAQFALQQYSTFINYESSLIKMIKDMLSGIIAKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH AAC28874.1 SsaH Virulence SPI-2 Protein 2e-27 100
ssaG CAA12193.1 SsaG Virulence SPI-2 Protein 2e-27 100
ssaG NP_456122.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-27 100
ssaG NP_805077.1 pathogenicity island protein Virulence SPI-2 Protein 3e-27 100
ssaG NP_460371.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-27 100
ssaG YP_216414.1 secretion system apparatus protein SsaG Virulence SPI-2 Protein 7e-27 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_12505 YP_008308816.1 type III secretion system needle protein SsaG VFG0507 Protein 9e-28 100