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Name : SEEB0189_12480 (SEEB0189_12480) Accession : YP_008308811.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaK Function : - COG functional category : - COG ID : - EC number : - Position : 2537268 - 2537942 bp Length : 675 bp Strand : - Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACCGTGGATAAC ATTACAATTAACTTTATTTGCACAAGAACAACAAGCTAAGAGCGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAAATAGCGTGGTTGCGT AAAAATACGCTGGAAAAAATGGAAGTAGAATGGCTGGAACAACATGTAAAACATTTACAAGAAGATGAAAATCAATTTCG TTCATTGGTCGATCACGCCGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT CCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGCTGATTATCGAGCCTGGTTTCTCTCCCGATCA GGCTGAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA ATGGCGAAGATAAAAGAGGTAGCGATGAATATTAA Protein sequence : MSFTSLPLTEINHKLPARNIIESPWITLQLTLFAQEQQAKSVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQEIAWLR KNTLEKMEVEWLEQHVKHLQEDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaK | YP_216419.1 | secretion system apparatus protein SsaK | Virulence | SPI-2 | Protein | 2e-101 | 99 |
| STY1709 | NP_456117.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 4e-101 | 99 |
| t1279 | NP_805082.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 4e-101 | 99 |
| ssaK | NP_460376.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 7e-99 | 98 |
| ssaK | CAA70533.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-97 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEB0189_12480 | YP_008308811.1 | type III secretion system protein SsaK | VFG0511 | Protein | 3e-99 | 98 |
