Gene Information

Name : araD (SEEB0189_01490)
Accession : YP_008306668.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 229603 - 230298 bp
Length : 696 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAGCAACTGAAAGCCGAGGTGCTGGCGGCCAACCTGGCGCTTCCGGCGCACGGGCTGGTCACCTTTACCTGGGG
CAACGTCAGCGCGGTCGATGAGACGCGCAAACTGATGGTCATCAAGCCTTCCGGCGTTGAATATGAGGTGATGACCGCCG
ACGATATGGTGGTGGTAGAGATCGCCAATGGCAAGGTCGTTGAAGGCAACAAAAAACCGTCGTCCGATACCGCGACCCAT
TTGGCGCTCTATCGCCGCTATCCGCAGATCGGCGGGATCGTTCATACCCATTCCCGCCATGCGACGATCTGGTCGCAGGC
CGGGCTCGATCTGCCCGCCTGGGGCACCACCCACGCCGACTATTTCTATGGCGCGATCCCCTGTACCCGACTGATGACCG
TTGAGGAGATTAACGGCGAGTACGAGTATCAGACCGGCGAGGTGATTATTAAAACCTTTGAAGAGCGCGGTCTGGATCCG
GCGCAAATCCCGGCGGTATTGGTTCATTCGCACGGCCCGTTTGCCTGGGGTAAAAATGCCGCCGATGCCGTCCACAACGC
CGTGGTGCTTGAGGAGTGTGCCTATATGGGGCTGTTCTCGCGCCAGCTGGCCCCGCAGCTACCGGATATGCAGCCTGAAC
TGCTCGATAAACACTATCTGCGTAAACACGGCGCGAATGCCTATTACGGGCAGTAA

Protein sequence :
MLEQLKAEVLAANLALPAHGLVTFTWGNVSAVDETRKLMVIKPSGVEYEVMTADDMVVVEIANGKVVEGNKKPSSDTATH
LALYRRYPQIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTVEEINGEYEYQTGEVIIKTFEERGLDP
AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPDMQPELLDKHYLRKHGANAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 4e-59 54