Gene Information

Name : SEEB0189_01085 (SEEB0189_01085)
Accession : YP_008306588.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 137874 - 138731 bp
Length : 858 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCCTGCTACGCAGCCACAGCATCAGACTATACTCAGTGGTGTCTATTAACCCTCTCCAACTACGTTATGTTTTGGCA
TGGTAACAATGCGATGTTATGGATAATTAACGATAATATTGAATTTAATCCAGAAATGAATCGCCTGGCGTCATTATCGA
GGCCAGATCTCAACATTATTCTGACAACGCCCGCCAGCCGCTGCTTGCGCCTTCTGCTGGAAAACGCCCCCTCCGTCGTC
TCACAACAAACATTCTTTCAAAAAGTGTGGGAAGAAGACGGCATGGTGGTGTCGGCAAATACGCTTTATCAGAATATCTC
CATTATTCGCCGCGGATTACGTACCGTTGGCGAAAATGAAGATACGCTGATAATCACGGTTCCGCGTAGAGGCTTTCAGA
TTGAGCCTAGTGTGAGCATCATGACCATCCGCAAAGACTTCGCTCAGGCAATAGAAAAAAAGGGTGAGACGCCACCGCGT
ATGTCAGGGCGTTGGTTTAAACATTATGTACCTGTACTTTGGATGACCGGGACATTTGCTGTCGGTATTTTGCTTGGCAC
TATCAGCTGGCAAACCGTTCCCGATAAGGATTTTTACGATCGCTACACGCTGGTTGAAACAACTCAGGGCTGTCATTTTT
TCTCGCGGAATGAAGATATCGAAAGCGGCAGCCGCTTTGCAAGCTATAAGTCAATGATTCTAAAAACCGGTATGGATTGT
CAGAAATACCCATGGGTCTATTTCCCTTCCAGCAGTCGCACCCCAGCGGTTACGGCATTGATTTGTCAGCAACCTTATAA
AACGCGCGGTGATACAGGTTGCGTGACGCTTTTTTTCCGCGGGGTGACACATGGGTAA

Protein sequence :
MSCYAATASDYTQWCLLTLSNYVMFWHGNNAMLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVV
SQQTFFQKVWEEDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPSVSIMTIRKDFAQAIEKKGETPPR
MSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDC
QKYPWVYFPSSSRTPAVTALICQQPYKTRGDTGCVTLFFRGVTHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 1e-117 99
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 6e-133 99
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 9e-133 99
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 1e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_01085 YP_008306588.1 transcriptional regulator VFG0570 Protein 5e-118 99