Gene Information

Name : SEEB0189_01075 (SEEB0189_01075)
Accession : YP_008306586.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 135701 - 136180 bp
Length : 480 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAATAATCGTCGTGGTTTAACCGCCGTCCTGGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAA
TCCGGGAAATGGTAATGGCGGCGGACATGGTAATAACGCGGCTAATCAGGGTAATAACGGTAACGGACATAAAGGAAATG
CCGGGCAAAAAACGGAACACCGTAAAAATGGCGGTAAACCGGATCACGTCGAGTCGGACATTAGCTATGCTGTCGCCAGG
CAACTGGCAGTGAATTTAGGGCTGACGGGTTATCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACC
GCTGCCGCCGGGAATCGCTAAAAAAACGGTGCCGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGA
AAATCGTTGGGGATAATCTGGTGCTGATCGCGCTCAGTACCGCGGTGGTCACGGCGATTATTAATGGCGTATTTGATTAA

Protein sequence :
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVAR
QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 1e-50 100
cigR AAD16958.1 CigR Virulence SPI-3 Protein 9e-51 100
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 1e-49 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_01075 YP_008306586.1 membrane protein VFG0573 Protein 4e-51 100