|
Name : SEEB0189_05830 (SEEB0189_05830) Accession : YP_008307517.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Unknown Product : type III secretion system effector protein OrgC Function : - COG functional category : - COG ID : - EC number : - Position : 1128744 - 1129196 bp Length : 453 bp Strand : + Note : expressed during and after host cell invasion; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGATACCGGGTACGATTCCGACTTCTTATTTGGTCCCGACAGCAGATACTGAAGCGACGGGTGTGGTTTCGTTGAGTGC CAGGGCCGCTATGCTGAATAATGTGGATAGCGCGCCTTTAAGCAATGGCGGCGACGTTGATCTTTATGAGGCATTCTACC AACGACTTTTGGCGCTTCCTGAGTCAGCCTCTTCTGAAACGCTTAAAGATAGCATTTATCAAGAGATGAATGCCTTCAAA GATCCTAACAGTGGTGATTCGGCTTTTGTTTCTTTTGAGCAGCAAACGGCTATGCTACAAAACATGTTAGCAAAAGTTGA ACCGGGCACCCATTTATATGAGGCTTTAAACGGGGTATTAGTTGGTACAATGAACGCACAGTCACAAATGACCTCCTGGA TGCAGGAGATTATTTTATCGGGCGGGGAAAACAAAGAGGCAATTGACTGGTGA Protein sequence : MIPGTIPTSYLVPTADTEATGVVSLSARAAMLNNVDSAPLSNGGDVDLYEAFYQRLLALPESASSETLKDSIYQEMNAFK DPNSGDSAFVSFEQQTAMLQNMLAKVEPGTHLYEALNGVLVGTMNAQSQMTSWMQEIILSGGENKEAIDW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SC2800 | YP_217787.1 | hypothetical protein | Not tested | SPI-1 | Protein | 6e-64 | 99 |
| t2770 | NP_806471.1 | hypothetical protein | Not tested | SPI-1 | Protein | 1e-63 | 98 |
| orgC | NP_461789.1 | hypothetical protein | Not tested | SPI-1 | Protein | 2e-63 | 98 |
| STY2989 | NP_457262.1 | hypothetical protein found within S. typhi pathogenicity island 1 | Not tested | SPI-1 | Protein | 1e-63 | 98 |
