|
Name : SEEB0189_05825 (SEEB0189_05825) Accession : YP_008307516.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : invasion protein OrgB Function : - COG functional category : - COG ID : - EC number : - Position : 1128067 - 1128747 bp Length : 681 bp Strand : + Note : oxygen regulated; required for internalization into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCTCAAAAATATCCCAATACCGTCCCCGCTTTCGCCTGTTGAGGGGATACTGATAAAGCGTAAAACGCTGGAACGTTA TTTCTCTATTGAAAGATTAGAACAGCAGGCGCATCAACGGGCTAAGCGTATTTTGCGAGAGGCGGAAGAAGAGGCAAAGA CCTTGCGGATGTACGCCTATCAGGAAGGTTACGAGCAGGGAATGATAGACGCGTTACAGCAGGTCGCCGCTTATCTTACT GATAATCAGACAATGGCCTGGAAGTGGATGGAAAAAATACAGATTTATGCCCGCGAGTTATTTTCAGCTGCGGTCGACCA TCCCGAAACGCTTTTAACCGTCCTGGATGAGTGGCTAAGGGATTTCGATAAGCCTGAGGGGCAACTTTTTTTAACACTGC CAGTTAATGCGAAAAAAGATCACCAAAAACTGATGGTGTTGCTTATGGAGAACTGGCCAGGCACTTTTAATCTTAAATAT CATCAGGAACAGCGCTTTATCATGAGTTGCGGCGATCAGATCGCAGAATTTTCACCTGAACAATTTGTTGAAACGGCAGT AGGCGTCATTAAGCATCATCTTGATGAACTTCCACAAGACTGCCGGACAATTTCTGATAACGCCATTAACGCACTTATTG ATGAATGGAAGACAAAAACGCAAGCGGAGGTTATAAGGTGA Protein sequence : MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKDHQKLMVLLMENWPGTFNLKY HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAEVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orgB | YP_217788.1 | flagellar biosynthesis/type III secretory pathway protein | Not tested | SPI-1 | Protein | 1e-104 | 100 |
| orgB | NP_461790.1 | needle complex export protein | Virulence | SPI-1 | Protein | 1e-104 | 100 |
| orgAb | NP_457263.1 | cell invasion protein | Virulence | SPI-1 | Protein | 2e-102 | 99 |
| orgA | NP_806472.1 | oxygen-regulated invasion protein | Virulence | SPI-1 | Protein | 2e-102 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEB0189_05825 | YP_008307516.1 | invasion protein OrgB | VFG0532 | Protein | 5e-105 | 100 |
