Gene Information

Name : SEEB0189_05815 (SEEB0189_05815)
Accession : YP_008307514.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1126781 - 1127539 bp
Length : 759 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGATTCGTCGATATCTATATACTTTTCTGCTGGTAATGACCCTTGCCGGCTGTAAGGATAAGGATCTTTTAAAAGGACT
GGACCAGGAACAGGCTAATGAGGTCATTGCCGTTCTGCAAATGCACAATATAGAGGCGAATAAAATTGATAGCGGAAAAT
TGGGCTATAGCATTACCGTTGCTGAGCCTGATTTTACCGCTGCGGTGTACTGGATTAAAACTTATCAGCTTCCTCCCCGG
CCACGGGTGGAAATAGCGCAGATGTTCCCGGCGGATTCGCTGGTATCGTCTCCGCGAGCTGAAAAGGCCAGGTTATATTC
GGCTATTGAACAGCGACTGGAACAGTCATTACAGACGATGGAGGGCGTGCTCTCCGCCAGGGTCCATATTAGTTATGATA
TTGATGCTGGTGAAAATGGCCGCCCGCCAAAACCTGTTCATCTGTCGGCATTAGCCGTATATGAACGAGGTTCGCCGCTT
GCGCATCAGATCAGCGATATCAAGCGTTTCTTAAAGAATAGTTTTGCCGATGTGGATTATGACAACATTTCTGTTGTGTT
GTCAGAACGTTCTGATGCCCAATTACAGGCTCCCGGCACACCAGTAAAACGTAATTCTTTTGCAACCAGTTGGATTGTGT
TGATTATTTTGTTATCCGTGATGTCAGCAGGCTTTGGCGTCTGGTATTACAAAAACCATTATGCCCGCAATAAGAAAGGC
ATAACGGCTGATGATAAGGCGAAATCGTCAAATGAATAG

Protein sequence :
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR
PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGFGVWYYKNHYARNKKG
ITADDKAKSSNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 3e-116 100
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 3e-116 100
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 3e-115 99
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 3e-115 99
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 5e-57 58
ECs3716 NP_311743.1 EprK Not tested LIM Protein 3e-54 56
eprK AAZ31284.1 EprK Virulence ETT2 Protein 3e-53 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_05815 YP_008307514.1 hypothetical protein VFG0533 Protein 1e-116 100
SEEB0189_05815 YP_008307514.1 hypothetical protein VFG0998 Protein 3e-45 47
SEEB0189_05815 YP_008307514.1 hypothetical protein VFG1787 Protein 2e-37 46