Name : SEEB0189_05800 (SEEB0189_05800) Accession : YP_008307511.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : type III secretion system needle complex protein PrgH Function : - COG functional category : - COG ID : - EC number : - Position : 1125015 - 1126193 bp Length : 1179 bp Strand : + Note : with InvG, PrgI, and Prg K makes up the membrane spanning needle complex; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGAAACATCAAAAGAGAAGACGATAACAAGCCCTGGGCCATACATAGTTCGATTACTTAACAGCTCACTGAACGGCTG TGAGTTTCCATTGCTGACAGGCCGAACACTCTTTGTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGCCAACTCCCTG ATATACCTGCCGATAGCTTTTTTATCCCGCTGGACCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATACGACC GAAATTATACTCCATGAGCTGAAAGAAGGAAATTCTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGA ATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCGTGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGA ACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGCACTGGCCGGGTTTTTTATATTGGGAATTGGGACTGTGGGGACGTTA TGGATACTTAACTCGCCGCAGCGGCAGGCCGCAGAGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGTTTTCAGGTGTT GCCAGGCCGGGACAAAATGCTCTATGTCGCTGCGCAAAATGAAAGAGATACGCTGTGGGCTCGTCAGGTTTTAGCGAGGG GCGATTATGATAAAAATGCGCGAGTGATTAACGAAAACGAAGAAAATAAGCGTATCTCTATCTGGCTGGATACCTATTAT CCGCAGCTGGCTTATTATCGGATTCATTTCGATGAGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACACGAT GAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAGCTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACGTTGA TGGACGATGTTACCGCAGCAGGCCAGGCGGAAGCGGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAG GGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCGATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTA CCGCACATGGGGAGGACGCTATGTGCAGTTTGCGATCGAATTAAAAGATGACTGGCTCAAGGGGCGCTCATTTCAGTACG GGGCGGAAGGTTATATCAAAATGAGCCCAGGCCATTGGTATTTCCCAAGCCCACTTTAA Protein sequence : METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDTT EIILHELKEGNSESRSVQLNTPIQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISIWLDTYY PQLAYYRIHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHK GGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
prgH | YP_217793.1 | cell invasion protein | Virulence | SPI-1 | Protein | 0.0 | 100 |
prgH | NP_461795.1 | needle complex inner membrane protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
prgH | NP_457268.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
prgH | NP_806477.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 0.0 | 99 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SEEB0189_05800 | YP_008307511.1 | type III secretion system needle complex protein PrgH | VFG0536 | Protein | 0.0 | 99 |