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Name : SEEB0189_05730 (SEEB0189_05730) Accession : YP_008307497.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaR Function : - COG functional category : - COG ID : - EC number : - Position : 1109155 - 1109946 bp Length : 792 bp Strand : + Note : involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCTTTACGCGTTGTACTTTGAAATTCATCACCTGGTTGCGTCTGCGGCACTAGGGTTTGCTCGCGTAGCGCCGATTTT TTTCTTCCTGCCGTTTTTGAATAGCGGGGTATTAAGCGGCGCGCCGAGAAACGCCATTATCATCCTGGTGGCATTGGGAG TATGGCCGCATGCATTGAACGAGGCGCCGCCGTTTTTATCGGTGGCGATGATCCCGTTAGTTCTGCAAGAAGCGGCGGTA GGCGTCATGCTGGGCTGTCTGCTGTCATGGCCTTTTTGGGTTATGCATGCGCTGGGTTGTATTATCGATAACCAGCGAGG GGCAACGCTAAGTAGCAGTATCGATCCGGCAAACGGTATTGATACCTCGGAAATGGCTAATTTCCTGAATATGTTTGCCG CTGTCGTTTATTTACAAAACGGCGGTCTGGTCACGATGGTTGACGTGTTAAATAAAAGCTATCAGCTATGCGATCCGATG AACGAGTGCACGCCTTCATTACCGCCGCTATTAACGTTTATTAATCAGGTGGCTCAAAACGCCTTGGTTCTGGCCAGTCC GGTGGTATTAGTGCTGTTGCTGTCAGAAGTATTCCTGGGTTTATTGTCGCGCTTTGCTCCGCAAATGAACGCTTTTGCGA TTTCACTGACGGTAAAAAGCGGTATTGCCGTTTTAATTATGCTGCTTTATTTCTCTCCGGTACTACCGGACAATGTACTG CGACTCTCTTTCCAGGCCACAGGGTTAAGCAGTTGGTTTTACGAGCGAGGGGCGACGCATGTCCTCGAATAA Protein sequence : MLYALYFEIHHLVASAALGFARVAPIFFFLPFLNSGVLSGAPRNAIIILVALGVWPHALNEAPPFLSVAMIPLVLQEAAV GVMLGCLLSWPFWVMHALGCIIDNQRGATLSSSIDPANGIDTSEMANFLNMFAAVVYLQNGGLVTMVDVLNKSYQLCDPM NECTPSLPPLLTFINQVAQNALVLASPVVLVLLLSEVFLGLLSRFAPQMNAFAISLTVKSGIAVLIMLLYFSPVLPDNVL RLSFQATGLSSWFYERGATHVLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 6e-103 | 99 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 7e-105 | 99 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 7e-105 | 99 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 3e-105 | 99 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 6e-33 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEB0189_05730 | YP_008307497.1 | type III secretion system protein SpaR | VFG0549 | Protein | 1e-105 | 99 |
| SEEB0189_05730 | YP_008307497.1 | type III secretion system protein SpaR | VFG1014 | Protein | 6e-36 | 52 |
| SEEB0189_05730 | YP_008307497.1 | type III secretion system protein SpaR | VFG2453 | Protein | 6e-32 | 45 |
