Gene Information

Name : spaN (SEEB0189_05710)
Accession : YP_008307493.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : antigen presentation protein SpaN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1106280 - 1107290 bp
Length : 1011 bp
Strand : +
Note : involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC
ATTAAAAAAAGCGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA
TGCATAAAGAAACGGCTTTACCGGTATTACTGGCGGCATGGCGACATGGCGCGCCAGCGAAATCAGAACATCACAATGGC
AACGTTTCTGGTCTGCATCATAACGGAAAAGGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC
TGTCGGTTTGATTTCTACGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGTCTAAAAATAGGCCGTTAGAAAGCG
TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCCGTGGAATCCGTTAGTGAAGTAACCGATAACGCCACGGGAATCTCT
GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC
GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCCTGACGATAAAGATCATAAAAAGGTTAAAGATG
TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG
GCGCAATCAAAGCCGATGATGACTATTTTTCCCACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT
TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC
AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT
CCGCAGCAGCAACAGCACAGACAACAATCTGGCGAGGAGGATGACGCCTGA

Protein sequence :
MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHGAPAKSEHHNG
NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISTEAKVDKSAALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS
DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN
PQQQQHRQQSGEEDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaN NP_457286.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 3e-133 99
spaN NP_806495.1 antigen presentation protein SpaN Virulence SPI-1 Protein 3e-133 99
invJ NP_461813.1 needle length control protein Virulence SPI-1 Protein 7e-134 99
invJ YP_217811.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 5e-134 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaN YP_008307493.1 antigen presentation protein SpaN VFG0553 Protein 3e-134 99