Gene Information

Name : spaM (SEEB0189_05705)
Accession : YP_008307492.1
Strain : Salmonella enterica CFSAN000189
Genome accession: NC_021844
Putative virulence/resistance : Virulence
Product : type III secretion system protein SpaM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1105837 - 1106280 bp
Length : 444 bp
Strand : +
Note : involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCATTCGCTGACCAGAATTAAAGTATTGCAGCGGCGCTGTACGGTATTTCATTCACAGTGTGAGTCGATATTACTTCG
CTATCAGGATGAGGACCGCGGGCTGCAGGCCGAGGAGGAGGCGATCCTTGAACAAATAGCGGGTCTGAAATTGTTATTAG
ATACGCTGCGTGCAGAAAACAGACAGCTCAGTCGTGAGGAAATTTATACGTTATTACGTAAGCAGTCTATTGTTCGCCGG
CAGATAAAAGATTTAGAACTCCAGATTATACAAATTCAGGAAAAACGGAGCGAGCTGGAAAAGAAAAGGGAAGAGTTTCA
GAAAAAAAGTAAATATTGGTTGCGCAAAGAAGGGAACTATCAACGCTGGATAATCCGTCAGAAAAGACACTATATCCAGC
GAGAGATACAGCAGGAAGAGGCCGAGTCAGAGGAGATAATTTAA

Protein sequence :
MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR
QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRHYIQREIQQEEAESEEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaM NP_457287.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 1e-40 100
spaM NP_806496.1 virulence-associated secretory protein Virulence SPI-1 Protein 1e-40 100
invI YP_217812.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 1e-39 99
invI NP_461814.1 needle complex assembly protein Virulence SPI-1 Protein 1e-39 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaM YP_008307492.1 type III secretion system protein SpaM VFG0554 Protein 3e-40 99