Gene Information

Name : deoA (M645_13910)
Accession : YP_008306148.1
Strain : Listeria monocytogenes J1926
Genome accession: NC_021840
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.4
Position : 2734618 - 2735919 bp
Length : 1302 bp
Strand : +
Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGAATGGTGGATATTATTTCCAAGAAAAGGGACGGCAAAGCTTTGTCAACAGAAGAAATTCAGTTTTTCATTGATGG
CTATACAAATGGGGAAATTCCAGATTATCAAGCAAGTGCTCTAGCCATGGCAATCTTTTTCCAAGATATGAATGATCAAG
AACGCGCAGATTTAACAATGGCAATGGTTGGCTCTGGCGATACGATTGACCTATCCGCAATTGAAGGAATCAAAGTCGAT
AAACATAGTACTGGCGGTGTTGGTGATACGACGACACTTGTTCTTGCTCCGCTCGTAGCAGCAGTTGGCGTACCGGTTGC
AAAGATGTCTGGCCGTGGCTTAGGTCATACAGGAGGAACCATTGATAAACTAGAATCTATCGAAGGCTTCCATATCGAAC
TAGATAAGAAAGATTTCATTGACCTAGTAAATCGCGACAAAGTAGCAGTTATTGGTCAATCAGGTAATCTTACACCAGCA
GATAAAAAAATGTACGCGCTTCGTGATGTAACAGGAACCGTAAACTCAATACCACTAATTGCAAGCTCTATTATGAGTAA
AAAAATCGCAGCGGGCGCAGATGCAATCGTACTTGATGTAAAAACAGGTGCTGGTGCATTTATGAAAACCGACGAGGATG
CCGAAAACCTAGCACATGCAATGGTTCGCATCGGTAATAACGTTGGTAGAAATACGATGGCAGTCATTTCTGATATGTCC
CAACCACTTGGCGAAGCAATCGGAAATGCTTTAGAAGTAAAAGAAGCCATCGATACATTAAAAGGCCAAGGACCAGAAGA
TTTAACAGAATTAGTTCTTGTACTTGGTAGTCAAATGGTCGTACTAGCCAAACAAGCGGAAACACTCGACGAAGCCCGCG
CTAAATTAATTGAAGTAATCGAAAACGGTGCAGCACTTGAGAAATTCAAAACATTCCTTTCCAATCAAGGTGGCGATGCA
AGCATTGTTGATCACCCAGAAAAACTTCCGCAAGCAAAATACCAAATCGAAGTACCCGCTAAATCATCTGGCTTCGTAAG
TCAAATCGTTGCCGATGAAATTGGCATTGCTGCAATGATCCTAGGCGCTGGTCGCGCAACGAAGGAAGACGAAATCAATC
TAGCAGTAGGTTTAATGCTACGCAAAAAAGTGGGCGATGCTGTTAAGGAAGGCGAATCACTCGTAACGATTTTCGCTGAC
CAAGAAGATGTCGAAAACGTAAAAGCAAAAATCTACGAAAACATTCAAATTTCCGACCACGCAACAGCACCAACCCTTGT
TCATAAAGTTATTACAGAATAA

Protein sequence :
MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMAIFFQDMNDQERADLTMAMVGSGDTIDLSAIEGIKVD
KHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFIDLVNRDKVAVIGQSGNLTPA
DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLAHAMVRIGNNVGRNTMAVISDMS
QPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLGSQMVVLAKQAETLDEARAKLIEVIENGAALEKFKTFLSNQGGDA
SIVDHPEKLPQAKYQIEVPAKSSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDAVKEGESLVTIFAD
QEDVENVKAKIYENIQISDHATAPTLVHKVITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 6e-70 47