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Name : lysS (M645_08055) Accession : YP_008305017.1 Strain : Listeria monocytogenes J1926 Genome accession: NC_021840 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1602055 - 1603551 bp Length : 1497 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGAGTAACGAGAATCATGAAGAACTAAATGACCAACTCATCGTCCGTCGCGAAAAAGTGGACACATTACGCGAAGAAGG CATAGATCCTTTTGGCGAAAAATTCATCCGTTCCATCAGCCCGGAAGAAATTGAAACAAAATTCGCTGATAAATCAAAAG AAGAACTTGAAGAAGCTGCTATTGAAGTTTCTGTAGCAGGTCGTATTATGACGAAACGTGTGAAAGGCAAAGTAGGTTTC ACACATATTCAAGACCGTTTCCATCAATTACAAATCTATATCCGTAAAGATGCGATTGGCGAAGATGCTTATGCAGTCTT CAAATTAGCGGATCTAGGTGACATTATTGGTATAAAAGGGACTATTTTCCGTACTAATACAGGTGAACTTTCTGTTAAAG CAACGGAATTCACTTTGCTTTCCAAATCATTACGTCCACTTCCTGATAAATATCATGGCTTAAAAGACGTAGAACAACGC TATCGTCAACGCTATTTAGACTTAATTACAAACGAAGAAAGCCAAAATCGTTTTGTGATGCGCAGTAAAATCTTGAAATA CACTCGTGATTACATGGATAATCAAGGATTCCTAGAAGTAGAAACTCCAGTGCTTCATACAATTGCTGGTGGTGCTGCTG CAAAACCATTTATTACGCACCATAATGCACTTGATATGGAATTATATTTACGAATTGCTTTAGAACTACACTTAAAACGC CTAATCGTTGGTGGGATGGATAAAGTATACGAAATCGGCCGCGTTTTCCGTAATGAAGGAACCTCCACGCGTCATAACCC AGAATTTACAATGTTAGAATCCTATGCAGCATACGAAGATTACGAAGATGTTATGGATTTGGTAGAAGGTTTAGTATCTA CAGTATGCAAACAAGTAAATGGAACAACAGAAATAACATACGGTGAATACAATGTAGATCTAACTCCAAACTGGCGCCGT ATCCACATGGCAGATGCTGTAAAAGAATATGTCGGAGTGGATTTCTGGAACGTAACTTCCGATGAAGAAGCACGCGAACT AGCTAAAAAACATAATGTGCCAGTAACGGAGCACATGACATACGGGCACATTCTTAATGAGTTTTTTGAAACATACGTAG AAGAAAAGCTTATTCAACCAACCTTTGTTTACGGACATCCGGTGGAAATTTCACCATTAGCGAAGAAAAACAAAGAAGAT GACCGTTTTACTGACCGTTTTGAATTATTTATCGTTGGTCGTGAACATGCAAATGCATTCTCGGAATTAAACGATCCAAT TGATCAAAGAGAGCGTTTTGAAGCGCAAATGAAAGAACGTGAGCAAGGTAATGATGAAGCGCACGGAATGGATGCAGATT TCCTTGAAGCTTTAGAATACGGTCTACCGCCGACTGGTGGACTTGGAATAGGTATCGATCGTCTAGTAATGCTATTAACA GATGCCCCGTCTATTCGTGATATCCTATTATTCCCAACTATGAAACGCCGCGACTAA Protein sequence : MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGF THIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKR LIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNVDLTPNWRR IHMADAVKEYVGVDFWNVTSDEEARELAKKHNVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKED DRFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLT DAPSIRDILLFPTMKRRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-105 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008305017.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-105 | 48 |
