Gene Information

Name : M640_11810 (M640_11810)
Accession : YP_008302852.1
Strain : Listeria monocytogenes J1776
Genome accession: NC_021839
Putative virulence/resistance : Virulence
Product : heme response regulator HssR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2334932 - 2335642 bp
Length : 711 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
TTGGTAAAAATTCTTGTAGTTGATGATGAAGCTTCTATTGTTACGTTACTGCAATTTAACATTGAAAAAGCTGGGTTTGA
TGTGGTAACAGCAGAAGACGGCAGAACCGGATACGAACTCGCTTTGTCCGAAAAACCAGATTTAATTGTGCTTGATTTAA
TGCTTCCTGAGATGGACGGAATCGAAGTAACAAAAAAACTTCGCCAAGATAAAGTAAATGTGCCAATTTTAATGTTAACG
GCAAAAGATGAAGAATTAGATAAAATTATCGGACTGGAACTTGGAGCAGATGACTATATGACTAAACCGTTTAGCCCAAG
AGAAGTAGTTGCAAGAATTAAAGCAATCTTGCGTCGAACAGAAGGAAAAGCCGAAATAATAGAAGAAATAACCGAAGATT
CGGAAGCTACGATATTAATTGGTGATTTGAAAATTTTGCCAGATAGTTATGAAGTGTATTTACAAGATGATTTACTTGAT
TTAACGCCAAAAGAATTTGAGTTATTGCTATTCTTGGCAAATCATCGTGGCAAAGTTTTCTCTAGAGACCAATTGCTCGA
TACTGTCTGGAACTATGATTACGTTGGAGAAACCCGAATTGTAGACGTTCATGTCAGCCATTTGCGCGATAAAATCGAAC
TAGATACAAAACAACCTAAATACATCAAAACAATTCGTGGCTTCGGTTATAAAATGGAGAACGTGAAATAA

Protein sequence :
MVKILVVDDEASIVTLLQFNIEKAGFDVVTAEDGRTGYELALSEKPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLT
AKDEELDKIIGLELGADDYMTKPFSPREVVARIKAILRRTEGKAEIIEEITEDSEATILIGDLKILPDSYEVYLQDDLLD
LTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQPKYIKTIRGFGYKMENVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-41 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M640_11810 YP_008302852.1 heme response regulator HssR HE999704.1.gene2815. Protein 3e-106 99
M640_11810 YP_008302852.1 heme response regulator HssR NC_002745.1124361.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_009782.5559369.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_002951.3237708.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_003923.1003749.p0 Protein 5e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_002758.1121668.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_009641.5332272.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_013450.8614421.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_007793.3914279.p0 Protein 6e-68 60
M640_11810 YP_008302852.1 heme response regulator HssR NC_002952.2859905.p0 Protein 9e-68 59
M640_11810 YP_008302852.1 heme response regulator HssR NC_007622.3794472.p0 Protein 8e-68 59
M640_11810 YP_008302852.1 heme response regulator HssR AE016830.1.gene1681. Protein 2e-69 56
M640_11810 YP_008302852.1 heme response regulator HssR NC_012469.1.7685629. Protein 1e-55 54
M640_11810 YP_008302852.1 heme response regulator HssR NC_012469.1.7686381. Protein 1e-60 50
M640_11810 YP_008302852.1 heme response regulator HssR AE000516.2.gene3505. Protein 2e-38 44
M640_11810 YP_008302852.1 heme response regulator HssR AF162694.1.orf4.gene Protein 1e-37 43
M640_11810 YP_008302852.1 heme response regulator HssR CP001485.1.gene721.p Protein 2e-36 42
M640_11810 YP_008302852.1 heme response regulator HssR CP001918.1.gene5135. Protein 4e-29 42
M640_11810 YP_008302852.1 heme response regulator HssR CP004022.1.gene3215. Protein 9e-37 41
M640_11810 YP_008302852.1 heme response regulator HssR EU250284.1.orf4.gene Protein 5e-39 41
M640_11810 YP_008302852.1 heme response regulator HssR FJ349556.1.orf0.gene Protein 6e-42 41
M640_11810 YP_008302852.1 heme response regulator HssR NC_002695.1.915041.p Protein 3e-32 41
M640_11810 YP_008302852.1 heme response regulator HssR CP000647.1.gene4257. Protein 6e-33 41
M640_11810 YP_008302852.1 heme response regulator HssR CP000034.1.gene3834. Protein 3e-32 41
M640_11810 YP_008302852.1 heme response regulator HssR CP001138.1.gene4273. Protein 8e-33 41
M640_11810 YP_008302852.1 heme response regulator HssR BAC0533 Protein 6e-33 41
M640_11810 YP_008302852.1 heme response regulator HssR CP000034.1.gene3671. Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M640_11810 YP_008302852.1 heme response regulator HssR VFG1563 Protein 1e-41 42
M640_11810 YP_008302852.1 heme response regulator HssR VFG1702 Protein 1e-41 42
M640_11810 YP_008302852.1 heme response regulator HssR VFG1386 Protein 2e-39 41
M640_11810 YP_008302852.1 heme response regulator HssR VFG1389 Protein 3e-33 41