|
Name : M640_01000 (M640_01000) Accession : YP_008300754.1 Strain : Listeria monocytogenes J1776 Genome accession: NC_021839 Putative virulence/resistance : Virulence Product : internalin F Function : - COG functional category : - COG ID : - EC number : - Position : 196226 - 198697 bp Length : 2472 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAGCGAAAAATAATTTTTTTAAACAATTAATTTCCATAATGACTGTCTTGAGCCTTTTGTTCATGGTATTAGGTAT TCAGGGTAATAATGAGGTTAAAGCAGCAACTTTAGCCACGCCACCAGCTCCAATTAATCAAATTTTCCCAGATGCAGATT TAGCAGAAGGAATACGAGCAGTGCTTCAAAAAGCAAGTGTCACAGATGTAGTGACACAAGAAGAATTAGAAAGCATTACG AAATTAGTAGTAGCCGGGGAAAAAGTAGCCTCCATTCAAGGGATCGAGTATTTAACTAATTTGGAGTACTTAAACCTTAA TGGAAACCAAATTACTGATATTAGCCCATTAAGTAATTTAGTTAAATTAACGAATCTGTATATTGGAACTAATAAAATCA CTGATATTAGTGCCTTGCAAAACTTAACTAATTTAAGGGAGCTATATCTTAATGAAGATAATATTAGCGATATTAGTCCA TTAGCAAATTTAACTAAAATGTATTCTTTGAATTTGGGGGCTAATCATAACCTCAGTGATTTAAGTCCGTTAAGCAATAT GACAGGTTTGAATTATTTGACAGTCACGGAGTCTAAAGTAAAAGATGTGACACCAATAGCCAATTTAACCGACTTATATA GTTTAAGTTTGAATTATAATCAAATTGAAGATATAAGTCCGCTAGCTAGTTTGACAAGTTTACATTATTTTACAGCATAT GTGAATCAAATTACTGATATTACTCCTGTAGCTAATATGACAAGGCTAAATTCTTTAAAGATAGGAAATAATAAAATTAC TGATTTAAGCCCATTAGCTAATCTATCACAATTAACTTGGCTAGAAATCGGTACCAATCAAATTAGCGATATTAATGCGG TTAAAGATTTAACTAAATTAAAAATGTTGAATGTTGGTAGTAACCAAATTAGTGATATATCTGTTCTAAATAATCTTTCC CAATTGAATTCTTTATTCTTGAATAATAATCAACTTGGGAATGAAGATATGGAAGTGATTGGTGGATTAACTAATTTAAC TACTTTATTTTTATCGCAAAATCATATTACAGACATAAGACCATTAGCAAGTTTAAGTAAAATGGATTCCGCTGACTTTG CAAATCAGGTGATAAAAAAACCAGCACGTAATTTTTCGAAGACATTATCTGTTCCGAATAATATAACTAGCATAGATGGA ACACTAGTTACTCCTAAGACAATTAGCAATAATGGAACCTACGACGCGCCAAACGTGAATTGGTCTTCGCCGAGCTATCT TCCAGAAGTAAGATATACATTCAAGCAAGATGTGGCGGTGGGATCAACCACAAGTAGTTATACTGGTATCATAATTCAAC CGCTAAATGAGCCAGTAGACTACAATGTCACATTTAATATAGACGGCAATACAAGCGAAGTAAAAACTGTAACAGAAGAA GATCTAATTCCAGAACCTACGAACCCGACCAAACAAGGTTATACATTTGATGGTTGGTACGACGCCGAAACAGGTGGAAC AAAATGGGACTTTACAACTGGGCAAATGCCTGCAAATGATCTCATGCTATATGCCCATTTTTCCGTAAATAGTTATCAAG TGAATTTTGATATAGATGGCGCAGTAATGAATGAAGCGGTAGTATACGATACTTTGCTCAATGAACCGACCGCTCCAACC AAACAAGGTTATACATTCGATGGTTGGTATGACGCAGAAACAGGCGGTAATAAGTGGGATTTCAAAACGATGAAAATGCC CGCAAATGATGTTACTTTATATGCACATTTTACTGTCAGCAGTTACCAAGTGAATTTTGATATAGATGGTGCGGTAACGA ATGAAGCAATAGTATACGATGCCTTACTCAATGAACCGGCGACTCCAACTAAACAAGGTTATACATTTGATGGCTGGTAT GACGCAGAAACAGGCGGTAATAAGTGGGATTTCAAAACAATGAAAATGCCCGCAAATGATGTCACTTTATATGCGCATTT TACCATCAACAACTATCAAGCTAATTTTGATATAGATGGTGCGGTAACGAATGAAACGATAACATATGATACCTTACTTA ATGAACCGACTGCTCCAACCAAACAAGGTTTCCTTTTCGATGGGTGGTATGACGCAGAAGTAGGCGGAACAAAATGGGAT TTTAACACGATGAAAATGCCTGCGAACGATATTAATTTGTACGCACATTTCAGTAAAGAAACGCCACTTATTCCTAGCCC ATCTGACGAATCAGACTCGAAACCTACCAATGGATCAATCACTATAAATGAACCGAGTGCAACTAGTATGCCAGCCCAAA ATAATAACATCACAGTAACAGCAGGGGAAAATACTCCAGAACTAACAACAGCTAAACTTCCGAAAACTGGAGATAATAAC CCGTGGCAAACACTATTCGCCGGGATATTACTTTCATCATCCGCGTTTTATATTTGGAGAAAAAAAGCATAA Protein sequence : MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRAVLQKASVTDVVTQEELESIT KLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNLS QLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDG TLVTPKTISNNGTYDAPNVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDGAVMNEAVVYDTLLNEPTAPT KQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWY DAETGGNKWDFKTMKMPANDVTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVTAGENTPELTTAKLPKTGDNN PWQTLFAGILLSSSAFYIWRKKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlF | AAB67968.1 | internalin | Virulence | Internalin | Protein | 0.0 | 74 |
| inlA | CAC20628.1 | internalin A | Virulence | Internalin | Protein | 1e-136 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M640_01000 | YP_008300754.1 | internalin F | VFG0075 | Protein | 8e-137 | 45 |
