|
Name : M641_12470 (M641_12470) Accession : YP_008299993.1 Strain : Listeria monocytogenes R2-502 Genome accession: NC_021838 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 2431472 - 2432659 bp Length : 1188 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGAACGGGAAAACATAGAGTGGAATTCAAAGAAAGAGGGCGTAAACATGGAACGACAAAGAAAAATTCAAATCTTAAA AGACATTGTGAATATTGATTCGACTAATGGGCATGAAGAACAAGTTGCGAACTATTTGCAAAAGTTGTTAGCTGAACACG GTATTGAATCCGAAAAGGTACAATACGACGTAGACAGAGCCAGCCTAGTTAGCGAAATTGGTTCCAGTGACGAGAAAGTT TTGGCGTTTTCAGGGCATATGGATGTCGTTGATGCGGGTGATGTCTCGAAGTGGAAGTTCCCACCTTTTGAAGCAGCAGA GCATGAAGGGAAAATATACGGACGTGGCGCGACGGATATGAAGTCAGGTCTAGCGGCGATGATTATTGCAATGATTGAGC TTCATGAAGAAAAACAAAAACTAAATGGCAAAATTAGATTATTAGCAACGGTTGGTGAAGAAGTCGGTGAACTTGGAGCC GAACAACTAACGCAAAAAGGTTACGCAGATGATTTAGATGGCTTGATTATCGGCGAACCGAGTGGACACCGGATTGTTTA TGCGCATAAAGGTTCCATTAATTATACCGTTAAATCCACTGGTAAAAATGCGCATAGTTCGATGCCGGAATTCGGTGTTA ATGCGATTGACAACTTGTTGCTATTTTATAATGAAGTAGAAAAATTCGTGAAATCAATTGATGCTACTAACGAAATATTA GGCGATTTTATTCATAATGTCACCGTAATTGATGGTGGAAATCAAGTCAATAGTATCCCTGAAAAAGCGCAACTAAAAGG GAATATTCGCTCGATTCCAGAAATGGATAATGAAACAGTGAAACAAGTGCTAGTGAAGATTATCAATAAGTTAAACAAAC AGGAAAATATGAATCTAGAATTAATATTTGATTATGACAAACAACCAGTATTTAGTGATAAAAATTCGGATTTAGTCCAC ATTGCTAAGAGCGTAGCAAGCGACATTGTCAAAGAAGAAATCCCATTACTCGGTATTTCCGGAACAACCGATGCAGCAGA ATTTACCAAAGCTAAGAAAGAGTTCCCAGTGATTATTTTTGGACCAGGAAACGAAACCCCTCACCAAGTAAACGAAAATG TTTCTATAGAGAATTATTTGGAGATGGTAGATGTTTACAAACGAATTGCCACCGAGTTTTTATCGTGA Protein sequence : MERENIEWNSKKEGVNMERQRKIQILKDIVNIDSTNGHEEQVANYLQKLLAEHGIESEKVQYDVDRASLVSEIGSSDEKV LAFSGHMDVVDAGDVSKWKFPPFEAAEHEGKIYGRGATDMKSGLAAMIIAMIELHEEKQKLNGKIRLLATVGEEVGELGA EQLTQKGYADDLDGLIIGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSIDATNEIL GDFIHNVTVIDGGNQVNSIPEKAQLKGNIRSIPEMDNETVKQVLVKIINKLNKQENMNLELIFDYDKQPVFSDKNSDLVH IAKSVASDIVKEEIPLLGISGTTDAAEFTKAKKEFPVIIFGPGNETPHQVNENVSIENYLEMVDVYKRIATEFLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 4e-173 | 97 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 3e-171 | 96 |
